RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 TMEM50BP56557 158 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 TFF3Q07654 80 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 MZT1Q08AG7 82 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 IL24Q13007 206 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 ASAH1Q13510 395 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 OXA1LQ15070 435 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 TRIM16LQ309B1 348 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 ADAM5Q6NVV9 412 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 DNM1P46Q6ZS02 220 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 WDR86Q86TI4 376 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 FBXL14Q8N1E6 418 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 BATF2Q8N1L9 274 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 CENPSQ8N2Z9 138 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 TOMM5Q8N4H5 51 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 MINDY2Q8NBR6 621 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 SCCPDHQ8NBX0 429 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 Q8NFD4 153 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 OR10AD1Q8NGE0 317 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 ITLN2Q8WWU7 325 aaPredicted RBP6.13□□□□□ -1.43
UBE4B-204ENST00000462658 AQP3Q92482 292 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 MRPL24Q96A35 216 aaKnown RBP6.13□□□□□ -1.43
UBE4B-204ENST00000462658 RAB3CQ96E17 227 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 SEH1LQ96EE3 360 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 MRPS24Q96EL2 167 aaKnown RBP6.13□□□□□ -1.43
UBE4B-204ENST00000462658 ZNF442Q9H7R0 627 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 CA10Q9NS85 328 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 MTCH1Q9NZJ7 389 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 KLK11Q9UBX7 282 aa6.13□□□□□ -1.43
UBE4B-204ENST00000462658 ELF5Q9UKW6 265 aaPredicted RBP6.13□□□□□ -1.43
UBE4B-204ENST00000462658 IGHV3-64DA0A0J9YX35 117 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 TMEM235A6NFC5 223 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 FOXI3A8MTJ6 420 aaPredicted RBP6.12□□□□□ -1.43
UBE4B-204ENST00000462658 SHISA9B4DS77 424 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 PRSS44E7EML9 344 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 H7C417 338 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 J3KRW8 73 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 CDIPTO14735 213 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 LYRM1O43325 122 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 AKR7A2O43488 359 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 RHBDL1O75783 438 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 ECDO95905 644 aaPredicted RBP6.12□□□□□ -1.43
UBE4B-204ENST00000462658 PTTG1O95997 202 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 MELTFP08582 738 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 OR4A8P0C604 315 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 GSTT2BP0CG30 244 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 HIST1H1DP16402 221 aaKnown RBP6.12□□□□□ -1.43
UBE4B-204ENST00000462658 AP3S2P59780 193 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 KRTAP10-11P60412 298 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 FGF12P61328 243 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 ZNF154Q13106 437 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 MAB21L1Q13394 359 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 ARL6IP1Q15041 203 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 ADIPOQQ15848 244 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 TAF9Q16594 264 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 PIGYQ3MUY2 71 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 BEX5Q5H9J7 111 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 ELP2Q6IA86 826 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 MZT2BQ6NZ67 158 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 GDPD3Q7L5L3 318 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 OR2Z1Q8NG97 314 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 GPX8Q8TED1 209 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 GTF3AQ92664 365 aaKnown RBP6.12□□□□□ -1.43
UBE4B-204ENST00000462658 ARHGAP5-AS1Q96IT6 56 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 ZNF488Q96MN9 340 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 NEDD4LQ96PU5 975 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 PECRQ9BY49 303 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 PLK3Q9H4B4 646 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 SCPEP1Q9HB40 452 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 RHOFQ9HBH0 211 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 PLEKHJ1Q9NW61 149 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 RBFOX1Q9NWB1 397 aaKnown RBP6.12□□□□□ -1.43
UBE4B-204ENST00000462658 MTFP1Q9UDX5 166 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 ST3GAL6Q9Y274 331 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 POLDIP2Q9Y2S7 368 aa6.12□□□□□ -1.43
UBE4B-204ENST00000462658 RBMX2Q9Y388 322 aaKnown RBP6.12□□□□□ -1.43
UBE4B-204ENST00000462658 A0A1B0GVG6 124 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 ANKRD20A5PA0PJZ0 165 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 MEIS3P1A6NDR6 274 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 ZSCAN5BA6NJL1 495 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 CENPXA8MT69 81 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 E7EQL1 145 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 F8VVB4 439 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 F8VWA3 439 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 MFNGO00587 321 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 GEMIN2O14893 280 aaKnown RBP6.11□□□□□ -1.43
UBE4B-204ENST00000462658 TIMM23O14925 209 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 ACAA1P09110 424 aaPredicted RBP6.11□□□□□ -1.43
UBE4B-204ENST00000462658 SPNP16150 400 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 PRKACAP17612 351 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 CD200P41217 278 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 SNU13P55769 128 aaKnown RBP6.11□□□□□ -1.43
UBE4B-204ENST00000462658 RBM11P57052 281 aaKnown RBP6.11□□□□□ -1.43
UBE4B-204ENST00000462658 GNG2P59768 71 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 NANOS2P60321 138 aaKnown RBP6.11□□□□□ -1.43
UBE4B-204ENST00000462658 SSBP1Q04837 148 aaKnown RBP6.11□□□□□ -1.43
UBE4B-204ENST00000462658 PNLIPRP3Q17RR3 467 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 PCGF3Q3KNV8 242 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 NHLRC3Q5JS37 347 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 PRAMEF6Q5VXH4 476 aa6.11□□□□□ -1.43
UBE4B-204ENST00000462658 OLFML2AQ68BL7 652 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms