RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 USP9XQ93008 2570 aaPredicted RBP12.54□□□□□ -0.4
RPRD1B-203ENST00000462548 SSNA1O43805 119 aa12.54□□□□□ -0.4
RPRD1B-203ENST00000462548 FPR2P25090 351 aa12.54□□□□□ -0.4
RPRD1B-203ENST00000462548 AP2S1P53680 142 aaPredicted RBP12.54□□□□□ -0.4
RPRD1B-203ENST00000462548 SEC61A1P61619 476 aaKnown RBP12.54□□□□□ -0.4
RPRD1B-203ENST00000462548 HLA-DRB3P79483 266 aa12.54□□□□□ -0.4
RPRD1B-203ENST00000462548 C4orf46Q504U0 113 aa12.54□□□□□ -0.4
RPRD1B-203ENST00000462548 CD276Q5ZPR3 534 aa12.54□□□□□ -0.4
RPRD1B-203ENST00000462548 LINC00469Q8N7U9 141 aa12.54□□□□□ -0.4
RPRD1B-203ENST00000462548 EGLN1Q9GZT9 426 aa12.54□□□□□ -0.4
RPRD1B-203ENST00000462548 KIF25Q9UIL4 384 aa12.54□□□□□ -0.4
RPRD1B-203ENST00000462548 KIAA2026Q5HYC2 2103 aa12.54□□□□□ -0.4
RPRD1B-203ENST00000462548 SNRPGP15A8MWD9 76 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 B3GALNT1O75752 331 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 SULT1A3P0DMM9 295 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 SULT1A4P0DMN0 295 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 STUMQ69YW2 141 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 ZNRF1Q8ND25 227 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 SEBOXQ9HB31 216 aaPredicted RBP12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 MBNL3Q9NUK0 354 aaKnown RBP12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 TRAPPC2LQ9UL33 140 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 KIR2DS1A0A191URI9 304 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 BET1O15155 118 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 CREBL2O60519 120 aaPredicted RBP12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 AADACP22760 399 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 KIR2DS4P43632 304 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 GLIPR1P48060 266 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 PPP1R1AQ13522 171 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 KIR2DS1Q14954 304 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 C2orf68Q2NKX9 166 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 SLC35E4Q6ICL7 350 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 GPN1Q9HCN4 374 aaPredicted RBP12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 SLC23A1Q9UHI7 598 aa12.53□□□□□ -0.4
RPRD1B-203ENST00000462548 TANC2Q9HCD6 1990 aa12.52□□□□□ -0.4
RPRD1B-203ENST00000462548 TMEM30CPA0ZSE6 113 aa12.52□□□□□ -0.4
RPRD1B-203ENST00000462548 MEX3AA1L020 520 aaKnown RBP12.52□□□□□ -0.4
RPRD1B-203ENST00000462548 CD8AP01732 235 aa12.52□□□□□ -0.4
RPRD1B-203ENST00000462548 AKR1C4P17516 323 aa12.52□□□□□ -0.4
RPRD1B-203ENST00000462548 ZBTB25P24278 435 aa12.52□□□□□ -0.4
RPRD1B-203ENST00000462548 DHRS2Q13268 280 aa12.52□□□□□ -0.4
RPRD1B-203ENST00000462548 TEX36Q5VZQ5 186 aa12.52□□□□□ -0.4
RPRD1B-203ENST00000462548 ZNF431Q8TF32 576 aaPredicted RBP12.52□□□□□ -0.4
RPRD1B-203ENST00000462548 KIRREL1Q96J84 757 aa12.52□□□□□ -0.4
RPRD1B-203ENST00000462548 DCTN5Q9BTE1 182 aa12.52□□□□□ -0.4
RPRD1B-203ENST00000462548 LRBAP50851 2863 aa12.52□□□□□ -0.4
RPRD1B-203ENST00000462548 DOPEY1Q5JWR5 2465 aa12.52□□□□□ -0.4
RPRD1B-203ENST00000462548 OOEPA6NGQ2 149 aa12.52□□□□□ -0.41
RPRD1B-203ENST00000462548 TMEM178BH3BS89 294 aa12.52□□□□□ -0.41
RPRD1B-203ENST00000462548 GYPAP02724 150 aa12.52□□□□□ -0.41
RPRD1B-203ENST00000462548 SOD3P08294 240 aa12.52□□□□□ -0.41
RPRD1B-203ENST00000462548 IRF2P14316 349 aa12.52□□□□□ -0.41
RPRD1B-203ENST00000462548 FXYD4P59646 89 aa12.52□□□□□ -0.41
RPRD1B-203ENST00000462548 SNRPD2P62316 118 aaKnown RBP12.52□□□□□ -0.41
RPRD1B-203ENST00000462548 KRBOX4Q5JUW0 171 aa12.52□□□□□ -0.41
RPRD1B-203ENST00000462548 CCL17Q92583 94 aa12.52□□□□□ -0.41
RPRD1B-203ENST00000462548 GAFA1Q96PS6 74 aa12.52□□□□□ -0.41
RPRD1B-203ENST00000462548 TMEM106BQ9NUM4 274 aa12.52□□□□□ -0.41
RPRD1B-203ENST00000462548 H7C1Q1 480 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 PGAM2P15259 253 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 EDDM3AQ14507 147 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 HMGN3Q15651 99 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 MOB1BQ7L9L4 216 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 TMEM185AQ8NFB2 350 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 OR4A4PQ8NGN8 299 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 TOMM40LQ969M1 308 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 MOB3AQ96BX8 217 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 SNX22Q96L94 193 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 CCL13Q99616 98 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 VRK1Q99986 396 aaPredicted RBP12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 CABLES2Q9BTV7 478 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 MEIKINA0A087WXM9 373 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 K7N7A8 449 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 ATF4P18848 351 aaPredicted RBP12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 GLP1RP43220 463 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 KCNJ3P48549 501 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 C11orf71Q6IPW1 123 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 LDLRAD3Q86YD5 345 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 FGFRL1Q8N441 504 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 PRR18Q8N4B5 295 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 SDSLQ96GA7 329 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 TAF9BQ9HBM6 251 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 OR1A1Q9P1Q5 309 aa12.51□□□□□ -0.41
RPRD1B-203ENST00000462548 MYO18BQ8IUG5 2567 aa12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 TRBV6-7A0A0A0MS04 114 aa12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 C9orf170A2RU37 121 aa12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 LRRC30A6NM36 301 aa12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 POM121CA8CG34 1229 aa12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 LYNX1G3V0Z9 82 aa12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 SMLR1H3BR10 107 aa12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 PPYP01298 95 aa12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 HLA-AP01891 365 aaKnown RBP12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 DANCRP0C864 163 aa12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 LYNX1P0DP58 116 aa12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 SUPT4H1P63272 117 aaKnown RBP12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 DHODHQ02127 395 aa12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 SURF2Q15527 256 aaPredicted RBP12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 ZNF788Q6ZQV5 615 aa12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 LYG2Q86SG7 212 aa12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 FAM216BQ8N7L0 139 aa12.5□□□□□ -0.41
RPRD1B-203ENST00000462548 OR13A1Q8NGR1 328 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms