RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 ATP1A1-AS1Q5TC04 95 aa5.08□□□□□ -1.6
CLK1-207ENST00000461981 RPL22L1Q6P5R6 122 aaKnown RBP5.08□□□□□ -1.6
CLK1-207ENST00000461981 DNM1P46Q6ZS02 220 aa5.08□□□□□ -1.6
CLK1-207ENST00000461981 ZFP62Q8NB50 900 aaPredicted RBP5.08□□□□□ -1.6
CLK1-207ENST00000461981 C16orf52Q8NHV5 167 aa5.08□□□□□ -1.6
CLK1-207ENST00000461981 CMTM2Q8TAZ6 248 aa5.08□□□□□ -1.6
CLK1-207ENST00000461981 FAM57AQ8TBR7 257 aa5.08□□□□□ -1.6
CLK1-207ENST00000461981 NT5CQ8TCD5 201 aa5.08□□□□□ -1.6
CLK1-207ENST00000461981 KISS1RQ969F8 398 aaPredicted RBP5.08□□□□□ -1.6
CLK1-207ENST00000461981 STARD4Q96DR4 205 aa5.08□□□□□ -1.6
CLK1-207ENST00000461981 YPEL2Q96QA6 119 aa5.08□□□□□ -1.6
CLK1-207ENST00000461981 C12orf49Q9H741 205 aa5.08□□□□□ -1.6
CLK1-207ENST00000461981 LSM5Q9Y4Y9 91 aaKnown RBP5.08□□□□□ -1.6
CLK1-207ENST00000461981 OARD1Q9Y530 152 aa5.08□□□□□ -1.6
CLK1-207ENST00000461981 NSG1A0A0A6YYJ2 146 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 GRIFINA4D1Z8 144 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 SAP18O00422 153 aaKnown RBP5.07□□□□□ -1.6
CLK1-207ENST00000461981 P2RX6O15547 441 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 CRYGCP07315 174 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 PET100P0DJ07 73 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 AOAHP28039 575 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 GRPRP30550 384 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 GCH1P30793 250 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 OTX2P32243 289 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 SIRPAP78324 504 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 TCEA2Q15560 299 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 DNM1P34Q6PK57 102 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 GFRALQ6UXV0 394 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 STAC2Q6ZMT1 411 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 FAM220AQ7Z4H9 259 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 TGIF2LYQ8IUE0 185 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 CISD2Q8N5K1 135 aaKnown RBP5.07□□□□□ -1.6
CLK1-207ENST00000461981 TMEM156Q8N614 296 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 FER1L6-AS1Q8NA97 138 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 C5orf17Q8NAS9 161 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 LFNGQ8NES3 379 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 OR5AK2Q8NH90 309 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 PRR7Q8TB68 274 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 PSMF1Q92530 271 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 OR7D2Q96RA2 312 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 FAM103A1Q9BTL3 118 aaKnown RBP5.07□□□□□ -1.6
CLK1-207ENST00000461981 K7EQM0 130 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 SYNGR4O95473 234 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 IGHG3P01860 377 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 IGLC2P0DOY2 106 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 IGLC3P0DOY3 106 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 MSR1P21757 451 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 TSPOP30536 169 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 GABRA3P34903 492 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 RPL23AP62750 156 aaKnown RBP5.07□□□□□ -1.6
CLK1-207ENST00000461981 CSNK2A1P68400 391 aaPredicted RBP5.07□□□□□ -1.6
CLK1-207ENST00000461981 PAFAH1B2P68402 229 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 BAXQ07812 192 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 SLC17A1Q14916 467 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 ANKRD16Q6P6B7 361 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 OPN5Q6U736 354 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 SERPINA9Q86WD7 417 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 ATOH7Q8N100 152 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 SLC38A9Q8NBW4 561 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 CSNK2A3Q8NEV1 391 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 OR4B1Q8NGF8 309 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 OR1B1Q8NGR6 318 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 MARCH1Q8TCQ1 289 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 AQP3Q92482 292 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 MRGPRFQ96AM1 343 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 TMEM45BQ96B21 275 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 SPSB1Q96BD6 273 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 UCN2Q96RP3 112 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 ATG10Q9H0Y0 220 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 METTL7AQ9H8H3 244 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 MTHFD2LQ9H903 347 aaPredicted RBP5.07□□□□□ -1.6
CLK1-207ENST00000461981 TMEM38BQ9NVV0 291 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 ETV7Q9Y603 341 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 WDR87Q6ZQQ6 2873 aa5.07□□□□□ -1.6
CLK1-207ENST00000461981 GCN1Q92616 2671 aaKnown RBP5.07□□□□□ -1.6
CLK1-207ENST00000461981 SPTBP11277 2137 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 SERINC4A6NH21 518 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 H7BYZ3 331 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 CDC42EP2O14613 210 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 ERI3O43414 337 aaKnown RBP5.06□□□□□ -1.6
CLK1-207ENST00000461981 GPR137BO60478 399 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 HAND1O96004 215 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 ZGLP1P0C6A0 271 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 ESDP10768 282 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 SLC6A8P48029 635 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 HSPB3Q12988 150 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 TSTA3Q13630 321 aaPredicted RBP5.06□□□□□ -1.6
CLK1-207ENST00000461981 ICAM4Q14773 271 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 ADIRFQ15847 76 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 PLXDC2Q6UX71 529 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 THSD4Q6ZMP0 1018 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 SSX8Q7RTT4 187 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 SLC16A9Q7RTY1 509 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 ZNF295-AS1Q8N0V1 137 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 LINC01555Q8NAE3 123 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 OR52L1Q8NGH7 329 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 OR4P4Q8NGL7 312 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 TM4SF19Q96DZ7 209 aa5.06□□□□□ -1.6
CLK1-207ENST00000461981 ZMYND19Q96E35 227 aaPredicted RBP5.06□□□□□ -1.6
CLK1-207ENST00000461981 PLA2G3Q9NZ20 509 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms