RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 SLC31A2O15432 143 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 GPX5O75715 221 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 FSTP19883 344 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 MNDAP41218 407 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 ARHGDIBP52566 201 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 HES1Q14469 280 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 NHLRC3Q5JS37 347 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 FAM27D1Q5T7N8 215 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 AWAT2Q6E213 333 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 C16orf82Q7Z2V1 217 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 CENPVQ7Z7K6 275 aaPredicted RBP12.33□□□□□ -0.44
NUP50-213ENST00000461437 DTX3Q8N9I9 347 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 TMEM104Q8NE00 496 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 OR4K15Q8NH41 348 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 ARL11Q969Q4 196 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 NCOR1P1Q9H4R4 102 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 IFT22Q9H7X7 185 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 LINC00574Q9H8X3 128 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 C8orf4Q9NR00 106 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 CKLFQ9UBR5 152 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 LINC00527Q9UJ94 153 aa12.33□□□□□ -0.44
NUP50-213ENST00000461437 FAM90A18PA6NE21 464 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 FAM90A16PA6NEW6 464 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 FAM90A20PA6NIJ5 464 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 FAM90A9PA6NNJ1 464 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 FAM90A12PA8MX19 464 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 FAM90A5PA8MXJ8 464 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 AIPO00170 330 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 SDCBPO00560 298 aaPredicted RBP12.32□□□□□ -0.44
NUP50-213ENST00000461437 IGKV1D-33P01593 117 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 IGKV1-33P01594 117 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 MT-ND4P03905 459 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 FAM90A15PP0C7V4 464 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 FAM90A13PP0C7W8 464 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 FAM90A14PP0C7W9 464 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 FAM90A24PP0C7X0 464 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 GTF2F2P13984 249 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 KCNJ3P48549 501 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 WNT4P56705 351 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 CD83Q01151 205 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 MADCAM1Q13477 382 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 KHDC1LQ5JSQ8 128 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 NANOGP1Q8N7R0 232 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 OR10X1Q8NGY0 326 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 MYDGFQ969H8 173 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 FAM46BQ96A09 425 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 CREB3L1Q96BA8 519 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 AKR1E2Q96JD6 320 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 KCNK15Q9H427 330 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 FKBP14Q9NWM8 211 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 CNOT2Q9NZN8 540 aaKnown RBP12.32□□□□□ -0.44
NUP50-213ENST00000461437 MOB4Q9Y3A3 225 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 AMMECR1Q9Y4X0 333 aaPredicted RBP12.32□□□□□ -0.44
NUP50-213ENST00000461437 HSPE1-MOB4S4R3N1 261 aa12.32□□□□□ -0.44
NUP50-213ENST00000461437 TCRBV4S1A1TA0A5B7 111 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 UBE2QL1A1L167 161 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 HSD17B6O14756 317 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 TMEM11P17152 192 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 GP2P55259 537 aaKnown RBP12.31□□□□□ -0.44
NUP50-213ENST00000461437 PAX5Q02548 391 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 EMX1Q04741 257 aaPredicted RBP12.31□□□□□ -0.44
NUP50-213ENST00000461437 MPV17LQ2QL34 196 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 RAB12Q6IQ22 244 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 CCDC144NLQ6NUI1 221 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 ZNF497Q6ZNH5 498 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 MOB3BQ86TA1 216 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 LYPD6Q86Y78 171 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 PRR18Q8N4B5 295 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 OR4F17Q8NGA8 305 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 OR10V1Q8NGI7 309 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 OR1L1Q8NH94 360 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 NOL4LQ96MY1 436 aaPredicted RBP12.31□□□□□ -0.44
NUP50-213ENST00000461437 OR4F4Q96R69 305 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 SELENOIQ9C0D9 397 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 PLCXD1Q9NUJ7 323 aa12.31□□□□□ -0.44
NUP50-213ENST00000461437 PAK1IP1Q9NWT1 392 aaPredicted RBP12.31□□□□□ -0.44
NUP50-213ENST00000461437 OOSP1A8MZH6 123 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 C12orf77C9JDV5 145 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 PTGES3LE9PB15 166 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 H3BUI4 141 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 CRTAPO75718 401 aaPredicted RBP12.3□□□□□ -0.44
NUP50-213ENST00000461437 FAM106CPP0CH98 169 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 IGLL1P15814 213 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 MGMTP16455 207 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 LOXL3P58215 753 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 TAS2R43P59537 309 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 SYT6Q5T7P8 510 aaPredicted RBP12.3□□□□□ -0.44
NUP50-213ENST00000461437 SIGIRRQ6IA17 410 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 OR10K2Q6IF99 312 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 C18orf65Q6ZTR6 163 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 LINC00596Q86U02 117 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 ZNF329Q86UD4 541 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 C5orf56Q8N8D9 126 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 NRG4Q8WWG1 115 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 TFAP2CQ92754 450 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 TMED9Q9BVK6 235 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 GFOD1Q9NXC2 390 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 ETAA1Q9NY74 926 aa12.3□□□□□ -0.44
NUP50-213ENST00000461437 RCC2Q9P258 522 aaKnown RBP12.3□□□□□ -0.44
NUP50-213ENST00000461437 PEX16Q9Y5Y5 336 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms