RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 PHLDA2Q53GA4 152 aa14.29□□□□□ -0.12
YIPF3-205ENST00000460547 GGNBP1Q5YKI7 109 aa14.29□□□□□ -0.12
YIPF3-205ENST00000460547 ZNF474Q6S9Z5 364 aaPredicted RBP14.29□□□□□ -0.12
YIPF3-205ENST00000460547 LGI3Q8N145 548 aa14.29□□□□□ -0.12
YIPF3-205ENST00000460547 STOML3Q8TAV4 291 aa14.29□□□□□ -0.12
YIPF3-205ENST00000460547 ITLN2Q8WWU7 325 aaPredicted RBP14.29□□□□□ -0.12
YIPF3-205ENST00000460547 MRPL24Q96A35 216 aaKnown RBP14.29□□□□□ -0.12
YIPF3-205ENST00000460547 MSI2Q96DH6 328 aaKnown RBP14.29□□□□□ -0.12
YIPF3-205ENST00000460547 C18orf12Q96KH6 178 aa14.29□□□□□ -0.12
YIPF3-205ENST00000460547 COQ3Q9NZJ6 369 aa14.29□□□□□ -0.12
YIPF3-205ENST00000460547 H0YL77 283 aa14.28□□□□□ -0.12
YIPF3-205ENST00000460547 SLC33A1O00400 549 aaPredicted RBP14.28□□□□□ -0.12
YIPF3-205ENST00000460547 CDIPTO14735 213 aa14.28□□□□□ -0.12
YIPF3-205ENST00000460547 HS3ST1O14792 307 aa14.28□□□□□ -0.12
YIPF3-205ENST00000460547 TIMM8AO60220 97 aaPredicted RBP14.28□□□□□ -0.12
YIPF3-205ENST00000460547 OR2H2O95918 312 aa14.28□□□□□ -0.12
YIPF3-205ENST00000460547 GNRHRP30968 328 aa14.28□□□□□ -0.12
YIPF3-205ENST00000460547 NAAAQ02083 359 aa14.28□□□□□ -0.12
YIPF3-205ENST00000460547 PAN3Q58A45 887 aaKnown RBP14.28□□□□□ -0.12
YIPF3-205ENST00000460547 FIP1L1Q6UN15 594 aaKnown RBP14.28□□□□□ -0.12
YIPF3-205ENST00000460547 ZNF497Q6ZNH5 498 aa14.28□□□□□ -0.12
YIPF3-205ENST00000460547 GLYATL2Q8WU03 294 aa14.28□□□□□ -0.12
YIPF3-205ENST00000460547 RRNAD1Q96FB5 475 aaKnown RBP14.28□□□□□ -0.12
YIPF3-205ENST00000460547 SLC25A32Q9H2D1 315 aa14.28□□□□□ -0.12
YIPF3-205ENST00000460547 OR5AC2Q9NZP5 309 aa14.28□□□□□ -0.12
YIPF3-205ENST00000460547 HECTD1Q9ULT8 2610 aa14.28□□□□□ -0.12
YIPF3-205ENST00000460547 SH2D1BO14796 132 aa14.27□□□□□ -0.12
YIPF3-205ENST00000460547 BET1O15155 118 aa14.27□□□□□ -0.12
YIPF3-205ENST00000460547 MPPED1O15442 326 aa14.27□□□□□ -0.12
YIPF3-205ENST00000460547 AGAP20933 346 aa14.27□□□□□ -0.12
YIPF3-205ENST00000460547 GCH1P30793 250 aa14.27□□□□□ -0.12
YIPF3-205ENST00000460547 NUP62P37198 522 aaPredicted RBP14.27□□□□□ -0.12
YIPF3-205ENST00000460547 LUMP51884 338 aaPredicted RBP14.27□□□□□ -0.12
YIPF3-205ENST00000460547 RGS7BPQ6MZT1 257 aaPredicted RBP14.27□□□□□ -0.12
YIPF3-205ENST00000460547 C20orf204Q6ZNR8 217 aa14.27□□□□□ -0.12
YIPF3-205ENST00000460547 RPRMLQ8N4K4 120 aa14.27□□□□□ -0.12
YIPF3-205ENST00000460547 DMRTA2Q96SC8 542 aa14.27□□□□□ -0.12
YIPF3-205ENST00000460547 FBXO9Q9UK97 447 aaPredicted RBP14.27□□□□□ -0.12
YIPF3-205ENST00000460547 GPR31O00270 319 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 MZT1Q08AG7 82 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 Q6ZR03 302 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 C11orf53Q8IXP5 236 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 ZNF565Q8N9K5 539 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 OR11L1Q8NGX0 322 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 PCNPQ8WW12 178 aaKnown RBP14.26□□□□□ -0.13
YIPF3-205ENST00000460547 ZNF471Q9BX82 626 aaPredicted RBP14.26□□□□□ -0.13
YIPF3-205ENST00000460547 SHARPINQ9H0F6 387 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 C3orf85A0A1B0GTC6 90 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 F5H0A9 414 aaPredicted RBP14.26□□□□□ -0.13
YIPF3-205ENST00000460547 GRPP07492 148 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 COL8A1P27658 744 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 SP6Q3SY56 376 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 HIST2H2BCQ6DN03 193 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 H1FOOQ8IZA3 346 aaPredicted RBP14.26□□□□□ -0.13
YIPF3-205ENST00000460547 OR1S1Q8NH92 325 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 RND1Q92730 232 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 S100PBPQ96BU1 408 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 TMEM222Q9H0R3 208 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 ZFP57Q9NU63 452 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 MBNL3Q9NUK0 354 aaKnown RBP14.26□□□□□ -0.13
YIPF3-205ENST00000460547 GSKIPQ9P0R6 139 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 TMED3Q9Y3Q3 217 aa14.26□□□□□ -0.13
YIPF3-205ENST00000460547 USP9YO00507 2555 aaPredicted RBP14.25□□□□□ -0.13
YIPF3-205ENST00000460547 IGKV1D-13A0A0B4J2D9 117 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 hCG_1807616A0A1W2PRN6 198 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 SIRPB1O00241 398 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 PHF1O43189 567 aaPredicted RBP14.25□□□□□ -0.13
YIPF3-205ENST00000460547 DEDDO75618 318 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 CLDN14O95500 239 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 WNT2P09544 360 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 IGKV1-13P0DP09 117 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 GLI4P10075 376 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 LMO1P25800 156 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 BEX5Q5H9J7 111 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 PDZD9Q8IXQ8 264 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 PLPPR1Q8TBJ4 325 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 CA5BP1Q8WTZ4 195 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 TMEM56Q96MV1 263 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 TP53RKQ96S44 253 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 SLC5A7Q9GZV3 580 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 GLS2Q9UI32 602 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 WIPI2Q9Y4P8 454 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 KLF2Q9Y5W3 355 aaPredicted RBP14.25□□□□□ -0.13
YIPF3-205ENST00000460547 TMEM56-RWDD3S4R434 201 aa14.25□□□□□ -0.13
YIPF3-205ENST00000460547 A0A1B0GW55 424 aa14.24□□□□□ -0.13
YIPF3-205ENST00000460547 DUXBA0A1W2PPF3 345 aa14.24□□□□□ -0.13
YIPF3-205ENST00000460547 MSGN1A6NI15 193 aa14.24□□□□□ -0.13
YIPF3-205ENST00000460547 PTBP3O95758 552 aaKnown RBP14.24□□□□□ -0.13
YIPF3-205ENST00000460547 HAND1O96004 215 aa14.24□□□□□ -0.13
YIPF3-205ENST00000460547 DUX4L2P0CJ85 424 aa14.24□□□□□ -0.13
YIPF3-205ENST00000460547 DUX4L3P0CJ86 424 aa14.24□□□□□ -0.13
YIPF3-205ENST00000460547 DUX4L4P0CJ87 422 aa14.24□□□□□ -0.13
YIPF3-205ENST00000460547 DUX4L5P0CJ88 424 aa14.24□□□□□ -0.13
YIPF3-205ENST00000460547 DUX4L6P0CJ89 424 aa14.24□□□□□ -0.13
YIPF3-205ENST00000460547 DUX4L7P0CJ90 424 aa14.24□□□□□ -0.13
YIPF3-205ENST00000460547 RCC1P18754 421 aaPredicted RBP14.24□□□□□ -0.13
YIPF3-205ENST00000460547 FABP6P51161 128 aa14.24□□□□□ -0.13
YIPF3-205ENST00000460547 S100A10P60903 97 aa14.24□□□□□ -0.13
YIPF3-205ENST00000460547 TOR2AQ5JU69 321 aa14.24□□□□□ -0.13
YIPF3-205ENST00000460547 SP5Q6BEB4 398 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms