RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 F8VVB4 439 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 F8VWA3 439 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 IFNL4K9M1U5 179 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 TIMM8AO60220 97 aaPredicted RBP11.97□□□□□ -0.49
ERCC3-205ENST00000460485 CFDP00746 253 aaPredicted RBP11.97□□□□□ -0.49
ERCC3-205ENST00000460485 ZNF44P15621 663 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 AADACP22760 399 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 DUSP1P28562 367 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 FOXF2Q12947 444 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 ZNF154Q13106 437 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 MSMO1Q15800 293 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 IAH1Q2TAA2 248 aaPredicted RBP11.97□□□□□ -0.49
ERCC3-205ENST00000460485 SMIM21Q3B7S5 101 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 LRRC37A5PQ49AS3 106 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 PAN3Q58A45 887 aaKnown RBP11.97□□□□□ -0.49
ERCC3-205ENST00000460485 SPATA46Q5T0L3 261 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 Q6P435 159 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 TRAT1Q6PIZ9 186 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 MYPOPQ86VE0 399 aaPredicted RBP11.97□□□□□ -0.49
ERCC3-205ENST00000460485 COMMD7Q86VX2 200 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 LDLRAD3Q86YD5 345 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 ZNF610Q8N9Z0 462 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 ZNF471Q9BX82 626 aaPredicted RBP11.97□□□□□ -0.49
ERCC3-205ENST00000460485 SHARPINQ9H0F6 387 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 OR51B6Q9H340 312 aa11.97□□□□□ -0.49
ERCC3-205ENST00000460485 SETD2Q9BYW2 2564 aaPredicted RBP11.96□□□□□ -0.49
ERCC3-205ENST00000460485 hCG_1807616A0A1W2PRN6 198 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 NUDT19A8MXV4 375 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 LILRA1O75019 489 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 ADAP1O75689 374 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 PTBP3O95758 552 aaKnown RBP11.96□□□□□ -0.49
ERCC3-205ENST00000460485 NMBP08949 121 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 LMO1P25800 156 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 FXYD4P59646 89 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 C6orf183Q5T699 404 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 ZNF324BQ6AW86 544 aaPredicted RBP11.96□□□□□ -0.49
ERCC3-205ENST00000460485 RGS7BPQ6MZT1 257 aaPredicted RBP11.96□□□□□ -0.49
ERCC3-205ENST00000460485 ZNF497Q6ZNH5 498 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 SEM1Q6ZVN7 128 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 OR10J5Q8NHC4 309 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 DYRK2Q92630 601 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 AKR1E2Q96JD6 320 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 C18orf12Q96KH6 178 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 TMEM222Q9H0R3 208 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 OPN3Q9H1Y3 402 aaPredicted RBP11.96□□□□□ -0.49
ERCC3-205ENST00000460485 TAAR3PQ9P1P4 343 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 FAM215AQ9Y5M1 114 aa11.96□□□□□ -0.49
ERCC3-205ENST00000460485 CHD3Q12873 2000 aaKnown RBP11.96□□□□□ -0.5
ERCC3-205ENST00000460485 PRRC2CQ9Y520 2896 aaKnown RBP11.95□□□□□ -0.5
ERCC3-205ENST00000460485 IGHV1-18A0A0C4DH31 117 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 FAM221AA4D161 298 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 E5RGE8 158 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 F5H0A9 414 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-205ENST00000460485 PRRG2O14669 202 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 MPPED1O15442 326 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 SPDEFO95238 335 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 CRYAAP02489 173 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 HOXB5P09067 269 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 OR5AC1P0C628 307 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 CD200P41217 278 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 GGNBP1Q5YKI7 109 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 HSD17B13Q7Z5P4 300 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-205ENST00000460485 MRGPRGQ86SM5 289 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 WDR86Q86TI4 376 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 H1FOOQ8IZA3 346 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-205ENST00000460485 FAM71E2Q8N5Q1 922 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 EIF4E3Q8N5X7 224 aaKnown RBP11.95□□□□□ -0.5
ERCC3-205ENST00000460485 TMEM56Q96MV1 263 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 CITED4Q96RK1 184 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 LIME1Q9H400 295 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 TMEM165Q9HC07 324 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 MBNL3Q9NUK0 354 aaKnown RBP11.95□□□□□ -0.5
ERCC3-205ENST00000460485 ELOVL5Q9NYP7 299 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 ZNF581Q9P0T4 197 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 NSG2Q9Y328 171 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 OR2W1Q9Y3N9 320 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 WIPI2Q9Y4P8 454 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 TMEM56-RWDD3S4R434 201 aa11.95□□□□□ -0.5
ERCC3-205ENST00000460485 HEATR1Q9H583 2144 aaKnown RBP11.95□□□□□ -0.5
ERCC3-205ENST00000460485 C3orf85A0A1B0GTC6 90 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 TMEM30CPA0ZSE6 113 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 RNF212BA8MTL3 300 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 H0Y980 276 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 SLC33A1O00400 549 aaPredicted RBP11.94□□□□□ -0.5
ERCC3-205ENST00000460485 DEDDO75618 318 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 OR2H2O95918 312 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 GAPDHP04406 335 aaKnown RBP11.94□□□□□ -0.5
ERCC3-205ENST00000460485 ZNF250P15622 560 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 GLRXP35754 106 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 CFHR2P36980 270 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 MPV17P39210 176 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 SNTB1Q13884 538 aaKnown RBP11.94□□□□□ -0.5
ERCC3-205ENST00000460485 IGSF11Q5DX21 431 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 SLC35E4Q6ICL7 350 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 Q6ZPA2 131 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 MSI2Q96DH6 328 aaKnown RBP11.94□□□□□ -0.5
ERCC3-205ENST00000460485 CCDC120Q96HB5 630 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 OR10C1Q96KK4 312 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 RNF126Q9BV68 326 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 SLC5A7Q9GZV3 580 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms