RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ZNF488Q96MN9 340 aa12.83□□□□□ -0.35
PTPRU-205ENST00000460170 OR2A7Q96R45 310 aa12.83□□□□□ -0.35
PTPRU-205ENST00000460170 RNF122Q9H9V4 155 aa12.83□□□□□ -0.35
PTPRU-205ENST00000460170 ADRA2AP08913 450 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 P2RY4P51582 365 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 RHOBP62745 196 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 TLE1Q04724 770 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 OVCH2Q7RTZ1 564 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 APCDD1LQ8NCL9 501 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 GDF15Q99988 308 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 TMPRSS5Q9H3S3 457 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 PILRBQ9UKJ0 227 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 TMEM14DPA8MWL7 114 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 SOX15O60248 233 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 CD74P04233 296 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 FGF12P61328 243 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 PCOLCEQ15113 449 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 RIPPLY2Q5TAB7 128 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 TMEM251Q8N6I4 163 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 ZBTB34Q8NCN2 500 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 ADAMTS17Q8TE56 1095 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 OR2J1Q9GZK6 312 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 FKBP11Q9NYL4 201 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 SLC45A2Q9UMX9 530 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 PHOX2AO14813 284 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 AGFG2O95081 481 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 TIAF1O95411 115 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 IGLV3-19P01714 112 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 GAPDHP04406 335 aaKnown RBP12.83□□□□□ -0.36
PTPRU-205ENST00000460170 RAB5AP20339 215 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 ATP6V0CP27449 155 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 MRPS11P82912 194 aaKnown RBP12.83□□□□□ -0.36
PTPRU-205ENST00000460170 CCL17Q92583 94 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 NUDT16L1Q9BRJ7 211 aaKnown RBP12.83□□□□□ -0.36
PTPRU-205ENST00000460170 IL36GQ9NZH8 169 aa12.83□□□□□ -0.36
PTPRU-205ENST00000460170 H0Y8G0 127 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 ADAM11O75078 769 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 PSG2P11465 335 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 CTRB1P17538 263 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 F2RP25116 425 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 RPS11P62280 158 aaKnown RBP eCLIP12.82□□□□□ -0.36
PTPRU-205ENST00000460170 CTRB2Q6GPI1 263 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 OR10D4PQ8NGN7 298 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 GNB4Q9HAV0 340 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 RCC2Q9P258 522 aaKnown RBP12.82□□□□□ -0.36
PTPRU-205ENST00000460170 FABP4P15090 132 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 FAM3AP98173 230 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 DOCK4Q8N1I0 1966 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 TMEM210A6NLX4 147 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 TMEM11P17152 192 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 NHLH2Q02577 135 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 SNAI3Q3KNW1 292 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 IGSF11Q5DX21 431 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 TRAPPC1Q9Y5R8 145 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 DHRS7CA6NNS2 312 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 COX6A1P12074 109 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 C9orf152Q5JTZ5 239 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 FAM209AQ5JX71 171 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 IFT22Q9H7X7 185 aa12.82□□□□□ -0.36
PTPRU-205ENST00000460170 SULT1A2P50226 295 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 FOXC1Q12948 553 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 BSXQ3C1V8 233 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 ZNF362Q5T0B9 420 aaPredicted RBP12.81□□□□□ -0.36
PTPRU-205ENST00000460170 Q9N2K0 584 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 GVINP1Q7Z2Y8 2422 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 APC2O95996 2303 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 LRRC75AQ8NAA5 344 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 FAM103A1Q9BTL3 118 aaKnown RBP12.81□□□□□ -0.36
PTPRU-205ENST00000460170 SLC2A8Q9NY64 477 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 OR5H1A6NKK0 313 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 DEDDO75618 318 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 OPN1MWP04001 364 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 OPN1MW2P0DN77 364 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 OPN1MW3P0DN78 364 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 OPRK1P41145 380 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 PLAC9Q5JTB6 97 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 NR2C2APQ86WQ0 139 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 FLVCR1-AS1Q8TAF5 88 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 HSF4Q9ULV5 492 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 CHRNA7P36544 502 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 UBE2V2Q15819 145 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 ANKRD55Q3KP44 614 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 TMEM230Q96A57 120 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 NRIP2Q9BQI9 281 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 GINS3Q9BRX5 216 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 C5orf66Q9H5L9 145 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 NAT8Q9UHE5 227 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 DOCK6Q96HP0 2047 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 CD82P27701 267 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 MSL2Q9HCI7 577 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 SH2D2AQ9NP31 389 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 VAX2Q9UIW0 290 aa12.81□□□□□ -0.36
PTPRU-205ENST00000460170 MTCL1Q9Y4B5 1905 aaKnown RBP12.8□□□□□ -0.36
PTPRU-205ENST00000460170 CACNA1EQ15878 2313 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 A0A0B4J293 547 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 RNF151Q2KHN1 245 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 MOGAT3Q86VF5 341 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 AP4M1O00189 453 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FBP1P09467 338 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 NHLRC3Q5JS37 347 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms