RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CTSDP07339 412 aaPredicted RBP17.22■□□□□ 0.35
SNX27-204ENST00000458013 GFRA1P56159 465 aa17.22■□□□□ 0.35
SNX27-204ENST00000458013 ADAT3Q96EY9 351 aaPredicted RBP17.22■□□□□ 0.35
SNX27-204ENST00000458013 CACFD1Q9UGQ2 172 aa17.22■□□□□ 0.35
SNX27-204ENST00000458013 IGHV5-10-1A0A0J9YXX1 117 aa17.22■□□□□ 0.35
SNX27-204ENST00000458013 MDP1Q86V88 176 aa17.22■□□□□ 0.35
SNX27-204ENST00000458013 OR1L1Q8NH94 360 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 ADAMTS17Q8TE56 1095 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 OR4C12Q96R67 309 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 INSIG2Q9Y5U4 225 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 RAB29O14966 203 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 SPINT1O43278 529 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 ADAM11O75078 769 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 IL24Q13007 206 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 LGALSLQ3ZCW2 172 aaPredicted RBP17.21■□□□□ 0.35
SNX27-204ENST00000458013 ATG4DQ86TL0 474 aaPredicted RBP17.21■□□□□ 0.35
SNX27-204ENST00000458013 LINC01387J3KSC0 135 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 CEACAM3P40198 252 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 KRTCAP3Q53RY4 240 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 OVCH2Q7RTZ1 564 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 GPR35Q9HC97 309 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 PPYP01298 95 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 PSG6Q00889 435 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 IL36RNQ9UBH0 155 aa17.21■□□□□ 0.35
SNX27-204ENST00000458013 H3BQ15 152 aa17.21■□□□□ 0.34
SNX27-204ENST00000458013 WDR73Q6P4I2 378 aa17.21■□□□□ 0.34
SNX27-204ENST00000458013 TMEM52Q8NDY8 209 aa17.21■□□□□ 0.34
SNX27-204ENST00000458013 THYN1Q9P016 225 aa17.21■□□□□ 0.34
SNX27-204ENST00000458013 COL22A1Q8NFW1 1626 aaPredicted RBP17.2■□□□□ 0.34
SNX27-204ENST00000458013 OPN3Q9H1Y3 402 aaPredicted RBP17.2■□□□□ 0.34
SNX27-204ENST00000458013 BVESQ8NE79 360 aa17.2■□□□□ 0.34
SNX27-204ENST00000458013 TRBV23-1A0A0A0MS06 115 aa17.2■□□□□ 0.34
SNX27-204ENST00000458013 NAT1P18440 290 aa17.2■□□□□ 0.34
SNX27-204ENST00000458013 GABRA6Q16445 453 aa17.2■□□□□ 0.34
SNX27-204ENST00000458013 LYRM2Q9NU23 88 aaPredicted RBP17.2■□□□□ 0.34
SNX27-204ENST00000458013 OTX1P32242 354 aaPredicted RBP17.2■□□□□ 0.34
SNX27-204ENST00000458013 TRA2AQ13595 282 aaKnown RBP eCLIP17.2■□□□□ 0.34
SNX27-204ENST00000458013 RAB1CQ92928 201 aa17.2■□□□□ 0.34
SNX27-204ENST00000458013 PTP4A1Q93096 173 aa17.2■□□□□ 0.34
SNX27-204ENST00000458013 ALS2Q96Q42 1657 aa17.19■□□□□ 0.34
SNX27-204ENST00000458013 AHDC1Q5TGY3 1603 aaPredicted RBP17.19■□□□□ 0.34
SNX27-204ENST00000458013 BTF3P20290 206 aaKnown RBP17.19■□□□□ 0.34
SNX27-204ENST00000458013 MARVELD1Q9BSK0 173 aa17.19■□□□□ 0.34
SNX27-204ENST00000458013 C9orf62Q8N4C0 152 aa17.19■□□□□ 0.34
SNX27-204ENST00000458013 OR8G5Q8NG78 346 aa17.19■□□□□ 0.34
SNX27-204ENST00000458013 ZNF426Q9BUY5 554 aa17.19■□□□□ 0.34
SNX27-204ENST00000458013 PEBP1P30086 187 aaKnown RBP17.19■□□□□ 0.34
SNX27-204ENST00000458013 RUNX1Q01196 453 aa17.19■□□□□ 0.34
SNX27-204ENST00000458013 ANAPC16Q96DE5 110 aa17.19■□□□□ 0.34
SNX27-204ENST00000458013 M0R3E3 92 aa17.19■□□□□ 0.34
SNX27-204ENST00000458013 OR8I2Q8N0Y5 310 aa17.19■□□□□ 0.34
SNX27-204ENST00000458013 COX14Q96I36 57 aa17.19■□□□□ 0.34
SNX27-204ENST00000458013 TMEM167BQ9NRX6 74 aa17.19■□□□□ 0.34
SNX27-204ENST00000458013 TCF21O43680 179 aa17.18■□□□□ 0.34
SNX27-204ENST00000458013 CLDN18P56856 261 aa17.18■□□□□ 0.34
SNX27-204ENST00000458013 RNF7Q9UBF6 113 aa17.18■□□□□ 0.34
SNX27-204ENST00000458013 TBX19O60806 448 aa17.18■□□□□ 0.34
SNX27-204ENST00000458013 TMEM251Q8N6I4 163 aa17.18■□□□□ 0.34
SNX27-204ENST00000458013 OR5AU1Q8NGC0 362 aa17.18■□□□□ 0.34
SNX27-204ENST00000458013 MBPP02686 304 aaPredicted RBP17.18■□□□□ 0.34
SNX27-204ENST00000458013 SPRED2Q7Z698 418 aa17.18■□□□□ 0.34
SNX27-204ENST00000458013 C9orf40Q8IXQ3 194 aa17.18■□□□□ 0.34
SNX27-204ENST00000458013 ZNF385AQ96PM9 386 aaKnown RBP17.18■□□□□ 0.34
SNX27-204ENST00000458013 ZNF665Q9H7R5 613 aa17.18■□□□□ 0.34
SNX27-204ENST00000458013 KHDC3LQ587J8 217 aa17.18■□□□□ 0.34
SNX27-204ENST00000458013 MYOZ3Q8TDC0 251 aa17.18■□□□□ 0.34
SNX27-204ENST00000458013 ASB5Q8WWX0 329 aa17.18■□□□□ 0.34
SNX27-204ENST00000458013 IGSF23A1L1A6 192 aa17.18■□□□□ 0.34
SNX27-204ENST00000458013 GBGT1Q8N5D6 347 aa17.18■□□□□ 0.34
SNX27-204ENST00000458013 PTX4Q96A99 478 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 ABHD14BQ96IU4 210 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 LMX1BO60663 402 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 ATP6V1FQ16864 119 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 ZNF502Q8TBZ5 544 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 ATXN7O15265 892 aaPredicted RBP17.17■□□□□ 0.34
SNX27-204ENST00000458013 OR1N2Q8NGR9 330 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 NPAS1Q99742 590 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 KIAA1551Q9HCM1 1747 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 ADAMTSL1Q8N6G6 1762 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 CRHP06850 196 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 ADRA2AP08913 450 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 RIGQ13278 110 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 EIF3IQ13347 325 aaKnown RBP17.17■□□□□ 0.34
SNX27-204ENST00000458013 ANKRD55Q3KP44 614 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 TMEM211Q6ICI0 200 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 DOCK1Q14185 1865 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 TMEM218A2RU14 115 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 OGG1O15527 345 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 PRSS23O95084 383 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 CCL13Q99616 98 aa17.17■□□□□ 0.34
SNX27-204ENST00000458013 SLC25A10Q9UBX3 287 aaPredicted RBP17.17■□□□□ 0.34
SNX27-204ENST00000458013 M0R143 59 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 IGKV1D-16P01601 117 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 RAC3P60763 192 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 SPANXN1Q5VSR9 72 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 Q8WTZ3 238 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 VAX2Q9UIW0 290 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 C7orf77A4D0Y5 90 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 BGLAPP02818 100 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 CCL8P80075 99 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms