RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 DIMT1Q9UNQ2 313 aaKnown RBP12.53□□□□□ -0.4
CHCHD3-204ENST00000457942 PSMB11A5LHX3 300 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 AMY1AP04745 511 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 AMY2AP04746 511 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 CGB3P0DN86 165 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 CGB7P0DN87 165 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 SLC35A2P78381 396 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 C10orf99Q6UWK7 81 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 ASCL4Q6XD76 172 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 LINC00596Q86U02 117 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 STX19Q8N4C7 294 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 JAGN1Q8N5M9 183 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 ZFP41Q8N8Y5 198 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 OR10A7Q8NGE5 316 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 CCDC107Q8WV48 283 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 TMEM80Q96HE8 168 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 IL36GQ9NZH8 169 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 ZNF581Q9P0T4 197 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 CLEC2DQ9UHP7 191 aa12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 SIRT4Q9Y6E7 314 aaPredicted RBP12.52□□□□□ -0.41
CHCHD3-204ENST00000457942 PNMA8CA0A1B0GUJ8 204 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 A0A1W2PPI3 338 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 NPIPB11E5RHQ5 1161 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 SDCBPO00560 298 aaPredicted RBP12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 HSD17B6O14756 317 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 ZNF780AO75290 641 aaPredicted RBP12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 IGKV1D-33P01593 117 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 IGKV1-33P01594 117 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 GTF2F2P13984 249 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 REG1BP48304 166 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 PAX5Q02548 391 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 DIAPH2-AS1Q14236 149 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 MPV17LQ2QL34 196 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 Q499Y3 187 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 TCTEX1D4Q5JR98 221 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 NHLRC3Q5JS37 347 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 LAIR2Q6ISS4 152 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 MOB3BQ86TA1 216 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 THNSL2Q86YJ6 484 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 OR8H3Q8N146 312 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 Q8NFD4 153 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 UBALD1Q8TB05 177 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 GHSRQ92847 366 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 ARL11Q969Q4 196 aa12.51□□□□□ -0.41
CHCHD3-204ENST00000457942 A0A1W2PP11 408 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 WI2-2373I1.2A0A1W2PRP0 233 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 SERPINE3A8MV23 424 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 AIPO00170 330 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 CCRL2O00421 344 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 OGG1O15527 345 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 LALBAP00709 142 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 IL3RAP26951 378 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 CD69Q07108 199 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 YIF1BQ5BJH7 314 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 SLC16A12Q6ZSM3 486 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 ZNF329Q86UD4 541 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 BPIFB6Q8NFQ5 453 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 MUL1Q969V5 352 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 WWC2-AS2Q96NR7 200 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 IFT22Q9H7X7 185 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 LINC00574Q9H8X3 128 aa12.5□□□□□ -0.41
CHCHD3-204ENST00000457942 IGHV3-43A0A0B4J1X8 118 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 IGHV3-72A0A0B4J1Y9 119 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 TRBV5-5A0A0J9YX44 114 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 A0A1W2PPK0 400 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 MAGEA13PA6NCF6 341 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 FAM90A18PA6NE21 464 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 FAM90A16PA6NEW6 464 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 FAM90A20PA6NIJ5 464 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 FAM90A9PA6NNJ1 464 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 FAM90A12PA8MX19 464 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 FAM90A5PA8MXJ8 464 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 NUDT19A8MXV4 375 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 MYL12BO14950 172 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 ATP6V1G2O95670 118 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 FAM90A15PP0C7V4 464 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 FAM90A13PP0C7W8 464 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 FAM90A14PP0C7W9 464 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 FAM90A24PP0C7X0 464 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 IGHV3-43DP0DP04 118 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 GZMHP20718 246 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 GPR176Q14439 515 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 AWAT2Q6E213 333 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 IZUMO2Q6UXV1 221 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 AHSA2Q719I0 299 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 C5orf56Q8N8D9 126 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 OR51D1Q8NGF3 324 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 TFAP2CQ92754 450 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 GGHQ92820 318 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 OR14A2Q96R54 314 aa12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 MRPS28Q9Y2Q9 187 aaKnown RBP12.49□□□□□ -0.41
CHCHD3-204ENST00000457942 TRAV8-7A0A075B6U6 113 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 NCBP2LA6PVI3 153 aaKnown RBP12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 FGF16O43320 207 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 MAS1P04201 325 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 GAPDHP04406 335 aaKnown RBP12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 TAS2R43P59537 309 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 SLC35B1P78383 322 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 ST3GAL4Q11206 333 aa12.48□□□□□ -0.41
CHCHD3-204ENST00000457942 DMKNQ6E0U4 476 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms