RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 WNT10AQ9GZT5 417 aa3.88□□□□□ -1.79
DEPDC1-202ENST00000456315 TMEM222Q9H0R3 208 aa3.88□□□□□ -1.79
DEPDC1-202ENST00000456315 GPR173Q9NS66 373 aa3.88□□□□□ -1.79
DEPDC1-202ENST00000456315 OR6C3Q9NZP0 311 aa3.88□□□□□ -1.79
DEPDC1-202ENST00000456315 GRHPRQ9UBQ7 328 aa3.88□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF462Q96JM2 2506 aa3.88□□□□□ -1.79
DEPDC1-202ENST00000456315 A0A1W2PNV4 684 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 HYPMO75409 117 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 CTSDP07339 412 aaPredicted RBP3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 CELA3BP08861 270 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 LINC00614P0C842 121 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 CBLN1P23435 193 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 CHRNA7P36544 502 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 H3F3AP84243 136 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 KISS1Q15726 138 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 OGFOD3Q6PK18 319 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 PCSK4Q6UW60 755 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 TEX43Q6ZNM6 134 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 RABEPKQ7Z6M1 372 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 CADM4Q8NFZ8 388 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 RHBDD1Q8TEB9 315 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 C22orf15Q8WYQ4 148 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 OVCA2Q8WZ82 227 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 VAX2Q9UIW0 290 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 CHST1O43916 411 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 HLA-DQA2P01906 255 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 SOD2P04179 222 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 H2BFMP0C1H6 154 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 FPR2P25090 351 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF133P52736 654 aaPredicted RBP3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF77Q15935 545 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 VN1R17PQ8TDU5 208 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 LMX1AQ8TE12 382 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 RPUSD4Q96CM3 377 aaKnown RBP3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 NIPSNAP3BQ9BS92 247 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 TRIM2Q9C040 744 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF700Q9H0M5 742 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 RRAGCQ9HB90 399 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 FKBP11Q9NYL4 201 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 ANXA10Q9UJ72 324 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 NSG1A0A0A6YYJ2 146 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 A0A1W2PQ45 241 aaPredicted RBP3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 A0A1W2PQY0 241 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 NKX6-3A6NJ46 265 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 NUDT19A8MXV4 375 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 G3V3Y1 287 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 TGOLN2O43493 480 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 SERF1AO75920 110 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 IGLC2P0DOY2 106 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 IGLC3P0DOY3 106 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 CD46P15529 392 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 HSD11B1P28845 292 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 SFTPDP35247 375 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 BIDP55957 195 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 ARFRP1Q13795 201 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 ELAVL3Q14576 367 aaKnown RBP3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 PRTGQ2VWP7 1150 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 CA13Q8N1Q1 262 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 FAM19A2Q8N3H0 131 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 KCNK17Q96T54 332 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 NRN1Q9NPD7 142 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 LUZP4Q9P127 313 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF107Q9UII5 783 aaPredicted RBP3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 AK3Q9UIJ7 227 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 SCDO00767 359 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 HCRTR2O43614 444 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 TACSTD2P09758 323 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 CHRNB4P30926 498 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 DYNLT3P51808 116 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 CSNK2A1P68400 391 aaPredicted RBP3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 SLC35B1P78383 322 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 CYCSP99999 105 aaKnown RBP3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 LDLRAD2Q5SZI1 272 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 FBXW12Q6X9E4 464 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 MEX3BQ6ZN04 569 aaKnown RBP3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 RD3Q7Z3Z2 195 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 NPAS4Q8IUM7 802 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 C10orf53Q8N6V4 93 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 CSNK2A3Q8NEV1 391 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 PIGTQ969N2 578 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 C1orf159Q96HA4 380 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 BMFQ96LC9 184 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 TMEM59Q9BXS4 323 aa3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 AKIRIN1Q9H9L7 192 aaPredicted RBP3.87□□□□□ -1.79
DEPDC1-202ENST00000456315 ODAMA1E959 279 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 B4DGG1 531 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 TMEM238C9JI98 176 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 HSPB1P04792 205 aaKnown RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 CST2P09228 141 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 TCN2P20062 427 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 FUT7Q11130 342 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 PHYHD1Q5SRE7 291 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 ACSM6Q6P461 480 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 DTWD2Q8NBA8 298 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 MFSD9Q8NBP5 474 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 OR2M7Q8NG81 312 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 PTPMT1Q8WUK0 201 aaPredicted RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 TSACCQ96A04 125 aaPredicted RBP3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 OR2M4Q96R27 311 aa3.86□□□□□ -1.79
DEPDC1-202ENST00000456315 C20orf144Q9BQM9 153 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms