RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 GPER1Q99527 375 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 BARHL1Q9BZE3 327 aa12.62□□□□□ -0.39
GPC1-206ENST00000455111 SNTNA6NMZ2 147 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 RPSAP08865 295 aaKnown RBP12.61□□□□□ -0.39
GPC1-206ENST00000455111 RAB7AP51149 207 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 ARHGDIBP52566 201 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 ZNF134P52741 427 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 MRPL28Q13084 256 aaKnown RBP12.61□□□□□ -0.39
GPC1-206ENST00000455111 RSU1Q15404 277 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 LAIR2Q6ISS4 152 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 RPL22L1Q6P5R6 122 aaKnown RBP12.61□□□□□ -0.39
GPC1-206ENST00000455111 OR8H3Q8N146 312 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 STPG2Q8N412 459 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 LINC00311Q8N616 119 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 OR10A7Q8NGE5 316 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 OR52N1Q8NH53 320 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 GPR148Q8TDV2 347 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 CCDC107Q8WV48 283 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 PGLYRP3Q96LB9 341 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 C9orf16Q9BUW7 83 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.61□□□□□ -0.39
GPC1-206ENST00000455111 ING4Q9UNL4 249 aa12.61□□□□□ -0.39
GPC1-206ENST00000455111 RPL36Q9Y3U8 105 aaKnown RBP12.61□□□□□ -0.39
GPC1-206ENST00000455111 AMMECR1Q9Y4X0 333 aaPredicted RBP12.61□□□□□ -0.39
GPC1-206ENST00000455111 MPZL2O60487 215 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 OR7C1O76099 320 aaPredicted RBP12.6□□□□□ -0.39
GPC1-206ENST00000455111 MT-ND4P03905 459 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 SERPINA2P20848 420 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 ZNF93P35789 620 aaPredicted RBP12.6□□□□□ -0.39
GPC1-206ENST00000455111 KCNJ3P48549 501 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 CFHR3Q02985 330 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 HES1Q14469 280 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 DDI2Q5TDH0 399 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 SLC16A12Q6ZSM3 486 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 IZUMO1Q8IYV9 350 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 PQLC1Q8N2U9 271 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 ZFP41Q8N8Y5 198 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 RAX2Q96IS3 184 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 Q96MT0 163 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 HSPB9Q9BQS6 159 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 PCDHB16Q9NRJ7 776 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 GFOD1Q9NXC2 390 aa12.6□□□□□ -0.39
GPC1-206ENST00000455111 SERPINE3A8MV23 424 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 H3BUI4 141 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 GPX5O75715 221 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 RPLP1P05386 114 aaKnown RBP12.59□□□□□ -0.39
GPC1-206ENST00000455111 GPR12P47775 334 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 CCDC58Q4VC31 144 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 KLHL22Q53GT1 634 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 VAX1Q5SQQ9 334 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 DMKNQ6E0U4 476 aaPredicted RBP12.59□□□□□ -0.39
GPC1-206ENST00000455111 ZNF497Q6ZNH5 498 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 SLC35E3Q7Z769 313 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 KLHL30-AS1Q8NEE0 82 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 HAVCR2Q8TDQ0 301 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 CHPT1Q8WUD6 406 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 RTN4IP1Q8WWV3 396 aaPredicted RBP12.59□□□□□ -0.39
GPC1-206ENST00000455111 SMIM19Q96E16 107 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 MRPL48Q96GC5 212 aaKnown RBP12.59□□□□□ -0.39
GPC1-206ENST00000455111 METTL9Q9H1A3 318 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 TMEM138Q9NPI0 162 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 RCC2Q9P258 522 aaKnown RBP12.59□□□□□ -0.39
GPC1-206ENST00000455111 NBEAL2Q6ZNJ1 2754 aa12.59□□□□□ -0.39
GPC1-206ENST00000455111 TRBV5-7A0A0A0MS05 114 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 TMEM30CPA0ZSE6 113 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 C12orf77C9JDV5 145 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 H0YHG0 523 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 CCRL2O00421 344 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 DUS4LO95620 317 aaKnown RBP12.58□□□□□ -0.4
GPC1-206ENST00000455111 BDKRB2P30411 391 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 F2RL1P55085 397 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 DEFB136Q30KP8 78 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 DEFB121Q5J5C9 76 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 SIGIRRQ6IA17 410 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 MOB3BQ86TA1 216 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 GAPTQ8N292 157 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 OR52M1Q8NGK5 317 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 OR10X1Q8NGY0 326 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 ARL11Q969Q4 196 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 ZNF184Q99676 751 aaPredicted RBP12.58□□□□□ -0.4
GPC1-206ENST00000455111 ABCG5Q9H222 651 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 BABAM2Q9NXR7 383 aa12.58□□□□□ -0.4
GPC1-206ENST00000455111 A0A1W2PPK0 400 aa12.57□□□□□ -0.4
GPC1-206ENST00000455111 SDCBPO00560 298 aaPredicted RBP12.57□□□□□ -0.4
GPC1-206ENST00000455111 MAGEB3O15480 346 aa12.57□□□□□ -0.4
GPC1-206ENST00000455111 MYCNOSP40205 109 aa12.57□□□□□ -0.4
GPC1-206ENST00000455111 ADARB1P78563 741 aaKnown RBP12.57□□□□□ -0.4
GPC1-206ENST00000455111 MPV17LQ2QL34 196 aa12.57□□□□□ -0.4
GPC1-206ENST00000455111 CT45A1Q5HYN5 189 aa12.57□□□□□ -0.4
GPC1-206ENST00000455111 ATAD3CQ5T2N8 411 aa12.57□□□□□ -0.4
GPC1-206ENST00000455111 TGIF2LXQ8IUE1 241 aa12.57□□□□□ -0.4
GPC1-206ENST00000455111 FAM71E2Q8N5Q1 922 aa12.57□□□□□ -0.4
GPC1-206ENST00000455111 C8orf31Q8N9H6 132 aa12.57□□□□□ -0.4
GPC1-206ENST00000455111 OR1L1Q8NH94 360 aa12.57□□□□□ -0.4
GPC1-206ENST00000455111 CT45A3Q8NHU0 189 aa12.57□□□□□ -0.4
GPC1-206ENST00000455111 GHSRQ92847 366 aa12.57□□□□□ -0.4
GPC1-206ENST00000455111 DCLRE1BQ9H816 532 aa12.57□□□□□ -0.4
GPC1-206ENST00000455111 DIMT1Q9UNQ2 313 aaKnown RBP12.57□□□□□ -0.4
GPC1-206ENST00000455111 ORC5O43913 435 aa12.56□□□□□ -0.4
GPC1-206ENST00000455111 GAPDHP04406 335 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms