RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 IDH3GP51553 393 aaPredicted RBP4.08□□□□□ -1.76
RIF1-207ENST00000454583 SEC61A1P61619 476 aaKnown RBP4.08□□□□□ -1.76
RIF1-207ENST00000454583 ODF4Q2M2E3 257 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 PIGYQ3MUY2 71 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 TRAPPC6BQ86SZ2 158 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 ZNF561Q8N587 486 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 PNLDC1Q8NA58 520 aaKnown RBP4.08□□□□□ -1.76
RIF1-207ENST00000454583 TERB2Q8NHR7 220 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 TSEN15Q8WW01 171 aaKnown RBP4.08□□□□□ -1.76
RIF1-207ENST00000454583 TSNAXQ99598 290 aaKnown RBP4.08□□□□□ -1.76
RIF1-207ENST00000454583 SLC5A7Q9GZV3 580 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 SLITRK2Q9H156 845 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 ATG5Q9H1Y0 275 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 Q9N2K0 584 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 ACACBO00763 2458 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 HEATR1Q9H583 2144 aaKnown RBP4.08□□□□□ -1.76
RIF1-207ENST00000454583 TRGV8A0A0C4DH27 118 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 K7N7A8 449 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 M0QYG6 137 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 PSG2P11465 335 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 CBX5P45973 191 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 NKPD1Q17RQ9 610 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 MPV17LQ2QL34 196 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 TMEM155Q4W5P6 130 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 IDO2Q6ZQW0 420 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 DMBX1Q8NFW5 382 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 FAM46BQ96A09 425 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 GINS4Q9BRT9 223 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 RAB18Q9NP72 206 aa4.08□□□□□ -1.76
RIF1-207ENST00000454583 NOP16Q9Y3C1 178 aaKnown RBP4.08□□□□□ -1.76
RIF1-207ENST00000454583 HELZ2Q9BYK8 2649 aaKnown RBP4.08□□□□□ -1.76
RIF1-207ENST00000454583 H7C1Q1 480 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 FARS2O95363 451 aaKnown RBP4.07□□□□□ -1.76
RIF1-207ENST00000454583 TFF1P04155 84 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 HEXAP06865 529 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 CTSDP07339 412 aaPredicted RBP4.07□□□□□ -1.76
RIF1-207ENST00000454583 CCNOP22674 350 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 CA6P23280 308 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 IL2RGP31785 369 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 SERPINF1P36955 418 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 AP2S1P53680 142 aaPredicted RBP4.07□□□□□ -1.76
RIF1-207ENST00000454583 GRK1Q15835 563 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 NMSQ5H8A3 153 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 P4HA3Q7Z4N8 544 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 STPG2Q8N412 459 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 OR56B1Q8NGI3 324 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 OR10C1Q96KK4 312 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 FAM234AQ9H0X4 552 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 SIRPDQ9H106 197 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 TMEM165Q9HC07 324 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 EDARQ9UNE0 448 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 ACACAQ13085 2346 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 FBN1P35555 2871 aaKnown RBP4.07□□□□□ -1.76
RIF1-207ENST00000454583 CENPXA8MT69 81 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 M0R1B8 84 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 GEMIN2O14893 280 aaKnown RBP4.07□□□□□ -1.76
RIF1-207ENST00000454583 SIGLEC5O15389 551 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 DHFRP00374 187 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 RBP4P02753 201 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 CD2P06729 351 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 ZFP36P26651 326 aaKnown RBP4.07□□□□□ -1.76
RIF1-207ENST00000454583 PRKXP51817 358 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 TMEM128Q5BJH2 165 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 SPATA46Q5T0L3 261 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 ZNF57Q68EA5 555 aaPredicted RBP4.07□□□□□ -1.76
RIF1-207ENST00000454583 C11orf87Q6NUJ2 197 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 LYPD2Q6UXB3 125 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 TMEM108Q6UXF1 575 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 C10orf105Q8TEF2 133 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 ZNF488Q96MN9 340 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 YPEL4Q96NS1 127 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 SPACA5Q96QH8 159 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 PRRT1Q99946 306 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 HDHD3Q9BSH5 251 aaPredicted RBP4.07□□□□□ -1.76
RIF1-207ENST00000454583 DIABLOQ9NR28 239 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 ING3Q9NXR8 418 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 ANXA10Q9UJ72 324 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 USP9YO00507 2555 aaPredicted RBP4.07□□□□□ -1.76
RIF1-207ENST00000454583 TEX15Q9BXT5 2789 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 ITPR3Q14573 2671 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 NF1P21359 2839 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 SPRY1O43609 319 aaPredicted RBP4.07□□□□□ -1.76
RIF1-207ENST00000454583 IGKV1-39P01597 117 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 IGKV1D-39P04432 117 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 CRYGBP07316 175 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 GNRHRP30968 328 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 APLNRP35414 380 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 GPM6AP51674 278 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 ZNF134P52741 427 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 SLC35E4Q6ICL7 350 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 FAM53AQ6NSI3 398 aaPredicted RBP4.07□□□□□ -1.76
RIF1-207ENST00000454583 PRSS57Q6UWY2 283 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 C9orf139Q6ZV77 190 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 PHYHIPLQ96FC7 376 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 PGAM5Q96HS1 289 aa4.07□□□□□ -1.76
RIF1-207ENST00000454583 ADAT1Q9BUB4 502 aaKnown RBP4.07□□□□□ -1.76
RIF1-207ENST00000454583 PPIAL4EA0A075B759 164 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 PPIAL4CA0A0B4J2A2 164 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 PPIAL4DF5H284 164 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 CREBL2O60519 120 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms