RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TMPRSS13Q9BYE2 586 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 C12orf4Q9NQ89 552 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 IFT46Q9NQC8 304 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 ABCB10Q9NRK6 738 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 MTFP1Q9UDX5 166 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 KCNK7Q9Y2U2 307 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 RBMX2Q9Y388 322 aaKnown RBP10.74□□□□□ -0.69
VPS33A-202ENST00000451053 ABCA1O95477 2261 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 F8P00451 2351 aa10.74□□□□□ -0.69
VPS33A-202ENST00000451053 DOCK11Q5JSL3 2073 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.73□□□□□ -0.69
VPS33A-202ENST00000451053 CELSR1Q9NYQ6 3014 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 A0A1W2PQ09 198 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 UBE2QL1A1L167 161 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 AVPP01185 164 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 LIPFP07098 398 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 CSF1P09603 554 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 GATA3P23771 443 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 DTYMKP23919 212 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 ERP29P30040 261 aaKnown RBP10.73□□□□□ -0.69
VPS33A-202ENST00000451053 RCVRNP35243 200 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 DEFA1P59665 94 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 DEFA3P59666 94 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 PAX8Q06710 450 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 BAK1Q16611 211 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 CR1LQ2VPA4 569 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 RNASE12Q5GAN4 147 aaKnown RBP10.73□□□□□ -0.69
VPS33A-202ENST00000451053 KRBOX4Q5JUW0 171 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 RSBN1Q5VWQ0 802 aaPredicted RBP10.73□□□□□ -0.69
VPS33A-202ENST00000451053 NUDCD2Q8WVJ2 157 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 DEDD2Q8WXF8 326 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 GCDHQ92947 438 aaPredicted RBP10.73□□□□□ -0.69
VPS33A-202ENST00000451053 TRIM63Q969Q1 353 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 ETAA1Q9NY74 926 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 ONECUT1Q9UBC0 465 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 OPN4Q9UHM6 478 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 ZNF107Q9UII5 783 aaPredicted RBP10.73□□□□□ -0.69
VPS33A-202ENST00000451053 AK3Q9UIJ7 227 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 KIF25Q9UIL4 384 aa10.73□□□□□ -0.69
VPS33A-202ENST00000451053 ODAMA1E959 279 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 MEIOCA2RUB1 952 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 FUOMA2VDF0 154 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 J3QLI3 93 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 PTHLHP12272 177 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 CCL3L1P16619 93 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 GDNFP39905 211 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 ARF6P62330 175 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 PAX5Q02548 391 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 GUCA2AQ02747 115 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 OLFML2AQ68BL7 652 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 ZNF57Q68EA5 555 aaPredicted RBP10.72□□□□□ -0.69
VPS33A-202ENST00000451053 C1orf229Q6ZS94 237 aaPredicted RBP10.72□□□□□ -0.69
VPS33A-202ENST00000451053 MOB1BQ7L9L4 216 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 TOMM5Q8N4H5 51 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 OCSTAMPQ9BR26 566 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 SIRPDQ9H106 197 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 C7orf69Q9H7B7 122 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 CHMP1AQ9HD42 196 aaPredicted RBP10.72□□□□□ -0.69
VPS33A-202ENST00000451053 MGAT4AQ9UM21 535 aa10.72□□□□□ -0.69
VPS33A-202ENST00000451053 TRBV6-6A0A0A6YYG2 114 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 TMEM30CPA0ZSE6 113 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 CENPXA8MT69 81 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 ORC5O43913 435 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 SSX5O60225 188 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 MMP9P14780 707 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 FAUP35544 74 aaKnown RBP10.71□□□□□ -0.69
VPS33A-202ENST00000451053 DLX6P56179 175 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 TAS2R19P59542 299 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 MEF2CQ06413 473 aaPredicted RBP10.71□□□□□ -0.69
VPS33A-202ENST00000451053 SRSF7Q16629 238 aaKnown RBP eCLIP10.71□□□□□ -0.69
VPS33A-202ENST00000451053 FAM120AOSQ5T036 256 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 STEAP3Q658P3 488 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 IL17RELQ6ZVW7 336 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 KIR3DL3Q8N743 410 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 Q8N7P7 452 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 SETD6Q8TBK2 473 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 C7orf50Q9BRJ6 194 aaKnown RBP10.71□□□□□ -0.69
VPS33A-202ENST00000451053 KLK11Q9UBX7 282 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 LPAR3Q9UBY5 353 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 ELF5Q9UKW6 265 aaPredicted RBP10.71□□□□□ -0.69
VPS33A-202ENST00000451053 ANAPC10Q9UM13 185 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 AUP1Q9Y679 476 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 LINC00312Q9Y6C7 94 aa10.71□□□□□ -0.69
VPS33A-202ENST00000451053 CSPG4Q6UVK1 2322 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 MEIKINA0A087WXM9 373 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 TRAV39A0A0B4J263 110 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 hADV38S2A0JD32 116 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 ANKRD20A5PA0PJZ0 165 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 INAFM1C9JVW0 142 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 NAPSAO96009 420 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 FCGR3AP08637 254 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 TBPP20226 339 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 GLP1RP43220 463 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 DLX1P56177 255 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 PRB3Q04118 309 aaPredicted RBP10.7□□□□□ -0.7
VPS33A-202ENST00000451053 DYRK1AQ13627 763 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 ACTBL2Q562R1 376 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 SLC35E4Q6ICL7 350 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 ZNF497Q6ZNH5 498 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 HOGA1Q86XE5 327 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms