RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 RBM39Q14498 530 aaKnown RBP15.48■□□□□ 0.07
USP40-207ENST00000450940 GLIPR1L1Q6UWM5 242 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 UNQ9370/PRO34162Q6UXP9 181 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 ZNF497Q6ZNH5 498 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 NDUFA11Q86Y39 141 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 JAGN1Q8N5M9 183 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 OR52M1Q8NGK5 317 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 MUL1Q969V5 352 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 SPACA1Q9HBV2 294 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 ERGIC3Q9Y282 383 aa15.48■□□□□ 0.07
USP40-207ENST00000450940 FAM90A10PA6NDY2 464 aa15.47■□□□□ 0.07
USP40-207ENST00000450940 FAM90A7PA6NKC0 464 aa15.47■□□□□ 0.07
USP40-207ENST00000450940 FAM90A23PA8MXZ1 464 aa15.47■□□□□ 0.07
USP40-207ENST00000450940 ORC5O43913 435 aa15.47■□□□□ 0.07
USP40-207ENST00000450940 MAPK3P27361 379 aaPredicted RBP15.47■□□□□ 0.07
USP40-207ENST00000450940 MADCAM1Q13477 382 aa15.47■□□□□ 0.07
USP40-207ENST00000450940 TMEM95Q3KNT9 176 aa15.47■□□□□ 0.07
USP40-207ENST00000450940 C6orf141Q5SZD1 244 aa15.47■□□□□ 0.07
USP40-207ENST00000450940 ATAD3CQ5T2N8 411 aa15.47■□□□□ 0.07
USP40-207ENST00000450940 GAPTQ8N292 157 aa15.47■□□□□ 0.07
USP40-207ENST00000450940 C8orf31Q8N9H6 132 aa15.47■□□□□ 0.07
USP40-207ENST00000450940 LEAP2Q969E1 77 aa15.47■□□□□ 0.07
USP40-207ENST00000450940 TOMM40LQ969M1 308 aa15.47■□□□□ 0.07
USP40-207ENST00000450940 RPEQ96AT9 228 aa15.47■□□□□ 0.07
USP40-207ENST00000450940 A0A1W2PPI3 338 aa15.46■□□□□ 0.07
USP40-207ENST00000450940 M0QZK8 103 aa15.46■□□□□ 0.07
USP40-207ENST00000450940 PEX14O75381 377 aa15.46■□□□□ 0.07
USP40-207ENST00000450940 MAS1P04201 325 aa15.46■□□□□ 0.07
USP40-207ENST00000450940 FAM106CPP0CH98 169 aa15.46■□□□□ 0.07
USP40-207ENST00000450940 ARSJQ5FYB0 599 aaPredicted RBP15.46■□□□□ 0.07
USP40-207ENST00000450940 NKAIN3Q8N8D7 197 aa15.46■□□□□ 0.07
USP40-207ENST00000450940 CAPSLQ8WWF8 208 aa15.46■□□□□ 0.07
USP40-207ENST00000450940 OR5M11Q96RB7 305 aa15.46■□□□□ 0.07
USP40-207ENST00000450940 CITED2Q99967 270 aaPredicted RBP15.46■□□□□ 0.07
USP40-207ENST00000450940 UQCC2Q9BRT2 126 aa15.46■□□□□ 0.07
USP40-207ENST00000450940 IGHV3-7P01780 117 aa15.45■□□□□ 0.06
USP40-207ENST00000450940 GLAP06280 429 aa15.45■□□□□ 0.06
USP40-207ENST00000450940 RAB7AP51149 207 aa15.45■□□□□ 0.06
USP40-207ENST00000450940 GP2P55259 537 aaKnown RBP15.45■□□□□ 0.06
USP40-207ENST00000450940 LOXL3P58215 753 aa15.45■□□□□ 0.06
USP40-207ENST00000450940 CD83Q01151 205 aa15.45■□□□□ 0.06
USP40-207ENST00000450940 ABCA11PQ4W5N1 156 aa15.45■□□□□ 0.06
USP40-207ENST00000450940 OR8H3Q8N146 312 aa15.45■□□□□ 0.06
USP40-207ENST00000450940 MS4A15Q8N5U1 240 aa15.45■□□□□ 0.06
USP40-207ENST00000450940 LINC00311Q8N616 119 aa15.45■□□□□ 0.06
USP40-207ENST00000450940 TMEM104Q8NE00 496 aa15.45■□□□□ 0.06
USP40-207ENST00000450940 NRG4Q8WWG1 115 aa15.45■□□□□ 0.06
USP40-207ENST00000450940 MYDGFQ969H8 173 aa15.45■□□□□ 0.06
USP40-207ENST00000450940 MND1Q9BWT6 205 aa15.45■□□□□ 0.06
USP40-207ENST00000450940 LSM2Q9Y333 95 aaKnown RBP15.45■□□□□ 0.06
USP40-207ENST00000450940 PRKDCP78527 4128 aaKnown RBP15.45■□□□□ 0.06
USP40-207ENST00000450940 MCRIP1C9JLW8 97 aa15.44■□□□□ 0.06
USP40-207ENST00000450940 SC5DO75845 299 aa15.44■□□□□ 0.06
USP40-207ENST00000450940 ZNF816Q0VGE8 651 aaPredicted RBP15.44■□□□□ 0.06
USP40-207ENST00000450940 GPR50Q13585 617 aa15.44■□□□□ 0.06
USP40-207ENST00000450940 DIAPH2-AS1Q14236 149 aa15.44■□□□□ 0.06
USP40-207ENST00000450940 IRF3Q14653 427 aa15.44■□□□□ 0.06
USP40-207ENST00000450940 LTC4SQ16873 150 aa15.44■□□□□ 0.06
USP40-207ENST00000450940 Q3ZCU0 254 aa15.44■□□□□ 0.06
USP40-207ENST00000450940 AWAT2Q6E213 333 aa15.44■□□□□ 0.06
USP40-207ENST00000450940 LYG1Q8N1E2 194 aa15.44■□□□□ 0.06
USP40-207ENST00000450940 OR5AU1Q8NGC0 362 aa15.44■□□□□ 0.06
USP40-207ENST00000450940 ARL11Q969Q4 196 aa15.44■□□□□ 0.06
USP40-207ENST00000450940 Q96M66 194 aa15.44■□□□□ 0.06
USP40-207ENST00000450940 GHRLQ9UBU3 117 aa15.44■□□□□ 0.06
USP40-207ENST00000450940 PTGES3LE9PB15 166 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 AIPO00170 330 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 CA11O75493 328 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 SNRNP70P08621 437 aaKnown RBP15.43■□□□□ 0.06
USP40-207ENST00000450940 CD37P11049 281 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 MGMTP16455 207 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 GNG10P50151 68 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 SLC35A2P78381 396 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 SPHARQ15513 63 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 NSUN5P1Q3KNT7 163 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 ACSM3Q53FZ2 586 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 RAB12Q6IQ22 244 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 DRAM1Q8N682 238 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 OR56B4Q8NH76 319 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 NEK7Q8TDX7 302 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 CCDC107Q8WV48 283 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 PHYHIPQ92561 330 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 BANF2Q9H503 90 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 GFOD1Q9NXC2 390 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 SCN3BQ9NY72 215 aa15.43■□□□□ 0.06
USP40-207ENST00000450940 A0A1W2PPE3 182 aa15.42■□□□□ 0.06
USP40-207ENST00000450940 H0YHG0 523 aa15.42■□□□□ 0.06
USP40-207ENST00000450940 LPLP06858 475 aa15.42■□□□□ 0.06
USP40-207ENST00000450940 FUT3P21217 361 aa15.42■□□□□ 0.06
USP40-207ENST00000450940 AQP4P55087 323 aa15.42■□□□□ 0.06
USP40-207ENST00000450940 EBI3Q14213 229 aa15.42■□□□□ 0.06
USP40-207ENST00000450940 INSL4Q14641 139 aa15.42■□□□□ 0.06
USP40-207ENST00000450940 TMEM30BQ3MIR4 351 aa15.42■□□□□ 0.06
USP40-207ENST00000450940 TCTEX1D4Q5JR98 221 aa15.42■□□□□ 0.06
USP40-207ENST00000450940 C1orf100Q5SVJ3 147 aa15.42■□□□□ 0.06
USP40-207ENST00000450940 KPRPQ5T749 579 aaPredicted RBP15.42■□□□□ 0.06
USP40-207ENST00000450940 SAMD5Q5TGI4 173 aa15.42■□□□□ 0.06
USP40-207ENST00000450940 SIGIRRQ6IA17 410 aa15.42■□□□□ 0.06
USP40-207ENST00000450940 CENPVQ7Z7K6 275 aaPredicted RBP15.42■□□□□ 0.06
USP40-207ENST00000450940 LRRTM1Q86UE6 522 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms