RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TSPOP30536 169 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 RPS16P62249 146 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 RHOGP84095 191 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 DLX2Q07687 328 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 GAGE2BQ13066 116 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ICAM4Q14773 271 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 DEFB115Q30KQ5 88 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 GAGE2EQ4V326 116 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ZNF324BQ6AW86 544 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 ZNF880Q6PDB4 577 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 HSD11B1LQ7Z5J1 315 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 DOLPP1Q86YN1 238 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FER1L6-AS1Q8NA97 138 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 LINC00116Q8NCU8 138 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 OR10D3Q8NH80 312 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 PFN4Q8NHR9 129 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 HSD17B8Q92506 261 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 MRPL38Q96DV4 380 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 SLC25A38Q96DW6 304 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 PIMREGQ9BSJ6 248 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 NDFIP1Q9BT67 221 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 SFXN3Q9BWM7 321 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 GPR62Q9BZJ7 368 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 PLA2G12AQ9BZM1 189 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 VN1R1Q9GZP7 353 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 GAGE2DQ9UEU5 116 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 C19orf25Q9UFG5 118 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 KLK13Q9UKR3 277 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ICAM5Q9UMF0 924 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 POLR3KQ9Y2Y1 108 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 IGHV2-26A0A0B4J1V2 119 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 A0A0U1RQS6 177 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 MYBPHLA2RUH7 354 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 MBLAC1A4D2B0 266 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 FITM1A5D6W6 292 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 C1QTNF9BB2RNN3 333 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 LINC01387J3KSC0 135 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 SIVA1O15304 175 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 B4GALT2O60909 372 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ZNF324O75467 553 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 SRSF10O75494 262 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 OR4A8P0C604 315 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 OR9G9P0C7N8 305 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 CDKN1CP49918 316 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 PDLIM4P50479 330 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 PLP2Q04941 152 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 SMAGPQ0VAQ4 97 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 Q0VG73 95 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 P2RY6Q15077 328 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 LYSMD4Q5XG99 296 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 RBMXL3Q8N7X1 1067 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 CADM4Q8NFZ8 388 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ZNF502Q8TBZ5 544 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 LOXL4Q96JB6 756 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 PGLYRP3Q96LB9 341 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 IP6K3Q96PC2 410 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 SF3B5Q9BWJ5 86 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 GGTLC1Q9BX51 225 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 GLIPR2Q9H4G4 154 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 CGGBP1Q9UFW8 167 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 CD84Q9UIB8 345 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 SLC17A4Q9Y2C5 497 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 BRCA1P38398 1863 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 RALGAPA2Q2PPJ7 1873 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 A0A1W2PQM1 296 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ODAMA1E959 279 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 PGPEP1LA6NFU8 196 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 IGLON5A6NGN9 336 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 OR4C46A6NHA9 309 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 C9orf118A6NHY6 69 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 H0Y980 276 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 GDF9O60383 454 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 TSPAN13O95857 204 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ADCYAP1P18509 176 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 CFPP27918 469 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FCER1GP30273 86 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 PSMB2P49721 201 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 ARG2P78540 354 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 MEF2AQ02078 507 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 KIR2DS3Q14952 304 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 C1orf100Q5SVJ3 147 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 CPEB2Q7Z5Q1 589 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 DAZLQ92904 295 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 SPSB4Q96A44 273 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 SARGQ9BW04 601 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 HINT2Q9BX68 163 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 QTRT1Q9BXR0 403 aaKnown RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 LINC00470Q9BZP3 86 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 CLEC1BQ9P126 229 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 SMPXQ9UHP9 88 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 C19orf53Q9UNZ5 99 aaPredicted RBP1.94□□□□□ -2.1
USP53-202ENST00000450251 TRAV8-4A0A0B4J246 113 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 A0A1B0GWB2 263 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 A0A1W2PR48 441 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FAM90A10PA6NDY2 464 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FAM90A18PA6NE21 464 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FAM90A16PA6NEW6 464 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FAM90A20PA6NIJ5 464 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 LINC01549A6NIU2 74 aa1.94□□□□□ -2.1
USP53-202ENST00000450251 FAM90A8PA6NJQ4 464 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms