RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SHISA7A6NL88 538 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 VSTM2BA6NLU5 285 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 C17orf105B2RV13 164 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 DIRC3C9JPN6 131 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 TIAF1O95411 115 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 GYPAP02724 150 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 NBEAP1P0C6P0 100 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 KRTDAPP60985 99 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 SGCBQ16585 318 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 CXorf66Q5JRM2 361 aaPredicted RBP7.44□□□□□ -1.22
LSM5-208ENST00000450169 FAM57BQ71RH2 274 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 TMEM144Q7Z5S9 345 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 TCEAL8Q8IYN2 117 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 SAXO1Q8IYX7 474 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 OR11L1Q8NGX0 322 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 BCL2L2Q92843 193 aaPredicted RBP7.44□□□□□ -1.22
LSM5-208ENST00000450169 ZNF524Q96C55 264 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 SLAMF6Q96DU3 332 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 TM4SF19Q96DZ7 209 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 ABHD14BQ96IU4 210 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 MRGPRX1Q96LB2 322 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 SPIN2AQ99865 258 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 SPIN2BQ9BPZ2 258 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 ZNF703Q9H7S9 590 aaPredicted RBP7.44□□□□□ -1.22
LSM5-208ENST00000450169 ZNF430Q9H8G1 570 aaPredicted RBP7.44□□□□□ -1.22
LSM5-208ENST00000450169 ZNF286AQ9HBT8 521 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 IL19Q9UHD0 177 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 CCL26Q9Y258 94 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 CHD7Q9P2D1 2997 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 COL4A2P08572 1712 aa7.44□□□□□ -1.22
LSM5-208ENST00000450169 K7ERU9 68 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 HRKO00198 91 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 SLC33A1O00400 549 aaPredicted RBP7.43□□□□□ -1.22
LSM5-208ENST00000450169 IL33O95760 270 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 SLC35E2P0CK97 266 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 TSPOP30536 169 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 SRPXP78539 464 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 MESP2Q0VG99 397 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 ACSF3Q4G176 576 aaPredicted RBP7.43□□□□□ -1.22
LSM5-208ENST00000450169 FFAR4Q5NUL3 377 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 ZNF468Q5VIY5 522 aaPredicted RBP7.43□□□□□ -1.22
LSM5-208ENST00000450169 CNKSR3Q6P9H4 555 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 FAM180AQ6UWF9 173 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 Q8N976 141 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 MRPL30Q8TCC3 161 aaKnown RBP7.43□□□□□ -1.22
LSM5-208ENST00000450169 IRF7Q92985 503 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 OR2A5Q96R48 311 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 ZNF586Q9NXT0 402 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 CLN8Q9UBY8 286 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 FBXL7Q9UJT9 491 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 PILRAQ9UKJ1 303 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 MRPS16Q9Y3D3 137 aaKnown RBP7.43□□□□□ -1.22
LSM5-208ENST00000450169 TRAV36DV7A0A075B6V5 113 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 IGHV1-69-2A0A0G2JMI3 117 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 OR5B21A6NL26 309 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 FAM166BA8MTA8 275 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 NRG2O14511 850 aaPredicted RBP7.43□□□□□ -1.22
LSM5-208ENST00000450169 HS3ST1O14792 307 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 VENTXO95231 258 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 SERPINA7P05543 415 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 MDH2P40926 338 aaKnown RBP7.43□□□□□ -1.22
LSM5-208ENST00000450169 RHOGP84095 191 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 TLE1Q04724 770 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 TRIM61Q5EBN2 209 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 TCF23Q7RTU1 214 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 C1QL2Q7Z5L3 287 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 ABHD12BQ7Z5M8 362 aaPredicted RBP7.43□□□□□ -1.22
LSM5-208ENST00000450169 CRIPAKQ8N1N5 446 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 KLHDC1Q8N7A1 406 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 CCDC71LQ8N9Z2 235 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 SLC46A1Q96NT5 459 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 ZDHHC11Q9H8X9 412 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 PLEKHJ1Q9NW61 149 aa7.43□□□□□ -1.22
LSM5-208ENST00000450169 KIAA0100Q14667 2235 aaKnown RBP7.43□□□□□ -1.22
LSM5-208ENST00000450169 AQP7P3A6NL99 342 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 CRISP2P16562 243 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 FMODQ06828 376 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 NSDHLQ15738 373 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 FNDC7Q5VTL7 733 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 PRR27Q6MZM9 219 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 SIGLECL1Q8N7X8 197 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 SCGB1C1Q8TD33 95 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 FAM3CQ92520 227 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 PSMF1Q92530 271 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 KLHDC7BQ96G42 594 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 DEFB118Q96PH6 123 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 KLHDC3Q9BQ90 382 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 RNF114Q9Y508 228 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 HEBP2Q9Y5Z4 205 aa7.42□□□□□ -1.22
LSM5-208ENST00000450169 PRRC2BQ5JSZ5 2229 aaKnown RBP7.42□□□□□ -1.22
LSM5-208ENST00000450169 LOC102724200A0A096LPH7 203 aaPredicted RBP7.41□□□□□ -1.22
LSM5-208ENST00000450169 C3orf85A0A1B0GTC6 90 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 A0A1W2PRS3 328 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 ZNF814B7Z6K7 855 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 ADAM20O43506 726 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 NXPH3O95157 252 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 PSG1P11464 419 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 OPRM1P35372 400 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 VIPR2P41587 438 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 PSMB3P49720 205 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms