RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 IL2RGP31785 369 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 HRH1P35367 487 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 NPY4RP50391 375 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 C6orf183Q5T699 404 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 TCF23Q7RTU1 214 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 TMEM229BQ8NBD8 167 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 COX4I2Q96KJ9 171 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 TAF9BQ9HBM6 251 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 MBNL3Q9NUK0 354 aaKnown RBP12.1□□□□□ -0.47
TNF-208ENST00000449264 KCNIP1Q9NZI2 227 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 OR6C3Q9NZP0 311 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 ANXA10Q9UJ72 324 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 WNK2Q9Y3S1 2297 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 PRRC2AP48634 2157 aaKnown RBP12.1□□□□□ -0.47
TNF-208ENST00000449264 KIR2DS1A0A191URI9 304 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 hADV38S2A0JD32 116 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 TRDCB7Z8K6 153 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 C12orf77C9JDV5 145 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 FABP7O15540 132 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 SCTP09683 121 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 GSTT2P0CG29 244 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 NAT1P18440 290 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 KIR2DS4P43632 304 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 LMO4P61968 165 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 ZNF273Q14593 569 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 KIR2DS1Q14954 304 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 STEAP1BQ6NZ63 245 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 ZNF565Q8N9K5 539 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 OR4D10Q8NGI6 311 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 OR4C16Q8NGL9 310 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 OR5H2Q8NGV7 314 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 IL1F10Q8WWZ1 152 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 KIRREL1Q96J84 757 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 PALMDQ9NP74 551 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 MCUBQ9NWR8 336 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 TBC1D24Q9ULP9 559 aa12.1□□□□□ -0.47
TNF-208ENST00000449264 ITPR3Q14573 2671 aa12.09□□□□□ -0.47
TNF-208ENST00000449264 RAB3DO95716 219 aa12.09□□□□□ -0.47
TNF-208ENST00000449264 AKAIN1P0CW23 69 aa12.09□□□□□ -0.47
TNF-208ENST00000449264 TAS2R46P59540 309 aa12.09□□□□□ -0.47
TNF-208ENST00000449264 RNASE10Q5GAN6 216 aaKnown RBP12.09□□□□□ -0.47
TNF-208ENST00000449264 KRTAP1-3Q8IUG1 177 aa12.09□□□□□ -0.47
TNF-208ENST00000449264 OR5AP2Q8NGF4 316 aa12.09□□□□□ -0.47
TNF-208ENST00000449264 OR1L1Q8NH94 360 aa12.09□□□□□ -0.47
TNF-208ENST00000449264 ARL11Q969Q4 196 aa12.09□□□□□ -0.47
TNF-208ENST00000449264 Q96MF0 132 aa12.09□□□□□ -0.47
TNF-208ENST00000449264 TINAGL1Q9GZM7 467 aaPredicted RBP12.09□□□□□ -0.47
TNF-208ENST00000449264 EHFQ9NZC4 300 aa12.09□□□□□ -0.47
TNF-208ENST00000449264 LPAR3Q9UBY5 353 aa12.09□□□□□ -0.47
TNF-208ENST00000449264 MGAT4AQ9UM21 535 aa12.09□□□□□ -0.47
TNF-208ENST00000449264 TRBV23-1A0A0A0MS06 115 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 C22orf46C9J442 243 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 SDCBPO00560 298 aaPredicted RBP12.08□□□□□ -0.48
TNF-208ENST00000449264 BET1O15155 118 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 GPR37O15354 613 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 HEXAP06865 529 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 CCL3L1P16619 93 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 USF1P22415 310 aaPredicted RBP12.08□□□□□ -0.48
TNF-208ENST00000449264 OR3A3P47888 321 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 RFX2P48378 723 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 LCN2P80188 198 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 MEF2CQ06413 473 aaPredicted RBP12.08□□□□□ -0.48
TNF-208ENST00000449264 HMGN3Q15651 99 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 SRSF7Q16629 238 aaKnown RBP eCLIP12.08□□□□□ -0.48
TNF-208ENST00000449264 LTC4SQ16873 150 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 ACTBL2Q562R1 376 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 IGSF11Q5DX21 431 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 TMEM200BQ69YZ2 307 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 TRAT1Q6PIZ9 186 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 Q6ZS49 121 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 RFESDQ8TAC1 157 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 LPAR2Q9HBW0 351 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 CALYQ9NYX4 217 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 ZNF107Q9UII5 783 aaPredicted RBP12.08□□□□□ -0.48
TNF-208ENST00000449264 RPUSD1Q9UJJ7 312 aaKnown RBP12.08□□□□□ -0.48
TNF-208ENST00000449264 LINC00312Q9Y6C7 94 aa12.08□□□□□ -0.48
TNF-208ENST00000449264 POM121CA8CG34 1229 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 PLA2G10O15496 165 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 LYRM1O43325 122 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 HBZP02008 142 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 CD74P04233 296 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 AMY2AP04746 511 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 OMGP23515 440 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 ZFP36P26651 326 aaKnown RBP12.07□□□□□ -0.48
TNF-208ENST00000449264 FAUP35544 74 aaKnown RBP12.07□□□□□ -0.48
TNF-208ENST00000449264 DEFA1P59665 94 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 DEFA3P59666 94 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 HERPUD1Q15011 391 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 CDK10Q15131 360 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 POC5Q8NA72 575 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 OR4A4PQ8NGN8 299 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 OR56B4Q8NH76 319 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 ZNF714Q96N38 554 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 C11orf54Q9H0W9 315 aaPredicted RBP12.07□□□□□ -0.48
TNF-208ENST00000449264 NCOR1P1Q9H4R4 102 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 HRASLSQ9HDD0 168 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 NECAP2Q9NVZ3 263 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 UBE2J1Q9Y385 318 aaPredicted RBP12.07□□□□□ -0.48
TNF-208ENST00000449264 MYO9AB2RTY4 2548 aa12.07□□□□□ -0.48
TNF-208ENST00000449264 LOC105371242A0A075B767 164 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms