RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 STEAP1BQ6NZ63 245 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 TRAT1Q6PIZ9 186 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 ZFAND2BQ8WV99 257 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 RAB39BQ96DA2 213 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 SSBP3Q9BWW4 388 aaPredicted RBP16.17■□□□□ 0.18
SGCE-207ENST00000447873 C19orf12Q9NSK7 152 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 LPAR3Q9UBY5 353 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 VPS13CQ709C8 3753 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 PDZD2O15018 2839 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 TRGV10A0A0A0MS01 117 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 CENPXA8MT69 81 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 FABP7O15540 132 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 GSTT2P0CG29 244 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 GZMHP20718 246 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 HRH1P35367 487 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 FAUP35544 74 aaKnown RBP16.16■□□□□ 0.18
SGCE-207ENST00000447873 OR3A3P47888 321 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 HLA-DRB3P79483 266 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 DYRK1AQ13627 763 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 ACTBL2Q562R1 376 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 BTN2A1Q7KYR7 527 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 PRR18Q8N4B5 295 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 OR5AP2Q8NGF4 316 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 OR5H2Q8NGV7 314 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 TAF9BQ9HBM6 251 aa16.16■□□□□ 0.18
SGCE-207ENST00000447873 TRBV23-1A0A0A0MS06 115 aa16.15■□□□□ 0.18
SGCE-207ENST00000447873 IGHV4-61A0A0C4DH41 118 aa16.15■□□□□ 0.18
SGCE-207ENST00000447873 M0QYG6 137 aa16.15■□□□□ 0.18
SGCE-207ENST00000447873 PLA2G10O15496 165 aa16.15■□□□□ 0.18
SGCE-207ENST00000447873 PHF1O43189 567 aaPredicted RBP16.15■□□□□ 0.18
SGCE-207ENST00000447873 RAB3DO95716 219 aa16.15■□□□□ 0.18
SGCE-207ENST00000447873 PMP2P02689 132 aa16.15■□□□□ 0.18
SGCE-207ENST00000447873 SCTP09683 121 aa16.15■□□□□ 0.18
SGCE-207ENST00000447873 TBPP20226 339 aa16.15■□□□□ 0.18
SGCE-207ENST00000447873 LMO4P61968 165 aa16.15■□□□□ 0.18
SGCE-207ENST00000447873 RNASE10Q5GAN6 216 aaKnown RBP16.15■□□□□ 0.18
SGCE-207ENST00000447873 FAM185AQ8N0U4 392 aa16.15■□□□□ 0.18
SGCE-207ENST00000447873 DEDD2Q8WXF8 326 aa16.15■□□□□ 0.18
SGCE-207ENST00000447873 TBC1D24Q9ULP9 559 aa16.15■□□□□ 0.18
SGCE-207ENST00000447873 C12orf77C9JDV5 145 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 CD74P04233 296 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 HEXAP06865 529 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 RFX2P48378 723 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 ASAH1Q13510 395 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 HMGN3Q15651 99 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 CR1LQ2VPA4 569 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 PRSS57Q6UWY2 283 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 C5orf24Q7Z6I8 188 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 ZNF554Q86TJ5 538 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 OR4C16Q8NGL9 310 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 CORO2AQ92828 525 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 TINAGL1Q9GZM7 467 aaPredicted RBP16.14■□□□□ 0.17
SGCE-207ENST00000447873 HRASLSQ9HDD0 168 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 MCUBQ9NWR8 336 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 UBE2J1Q9Y385 318 aaPredicted RBP16.14■□□□□ 0.17
SGCE-207ENST00000447873 LINC00312Q9Y6C7 94 aa16.14■□□□□ 0.17
SGCE-207ENST00000447873 LYRM1O43325 122 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 SSTR5P35346 364 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 MEF2DQ14814 521 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 CDK10Q15131 360 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 CD276Q5ZPR3 534 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 TMEM200BQ69YZ2 307 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 FAAP20Q6NZ36 180 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 POC5Q8NA72 575 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 OR4D10Q8NGI6 311 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 OR4A4PQ8NGN8 299 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 UBALD1Q8TB05 177 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 IL1F10Q8WWZ1 152 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 ARL11Q969Q4 196 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 KIRREL1Q96J84 757 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 C7orf50Q9BRJ6 194 aaKnown RBP16.13■□□□□ 0.17
SGCE-207ENST00000447873 NECAP2Q9NVZ3 263 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 EHFQ9NZC4 300 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 YLPM1P49750 1951 aaKnown RBP16.13■□□□□ 0.17
SGCE-207ENST00000447873 SDCBPO00560 298 aaPredicted RBP16.13■□□□□ 0.17
SGCE-207ENST00000447873 SPINT2O43291 252 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 IFNA6P05013 189 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 IL2RGP31785 369 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 ZNF273Q14593 569 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 C11orf91Q3C1V1 193 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 IGSF11Q5DX21 431 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 TCF23Q7RTU1 214 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 C11orf54Q9H0W9 315 aaPredicted RBP16.13■□□□□ 0.17
SGCE-207ENST00000447873 OPN4Q9UHM6 478 aa16.13■□□□□ 0.17
SGCE-207ENST00000447873 RPUSD1Q9UJJ7 312 aaKnown RBP16.13■□□□□ 0.17
SGCE-207ENST00000447873 LOC105371242A0A075B767 164 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 NAP1L6A6NFF2 107 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 ZNF729A6NN14 1252 aaPredicted RBP16.12■□□□□ 0.17
SGCE-207ENST00000447873 HBZP02008 142 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 AMY2AP04746 511 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 CTXN2P0C2S0 81 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 USF1P22415 310 aaPredicted RBP16.12■□□□□ 0.17
SGCE-207ENST00000447873 VAX1Q5SQQ9 334 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 MZT2BQ6NZ67 158 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 OVCH2Q7RTZ1 564 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 OR1L1Q8NH94 360 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 RFESDQ8TAC1 157 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 GALMQ96C23 342 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 ZNF714Q96N38 554 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 GAL3ST2Q9H3Q3 398 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms