RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 FAM185AQ8N0U4 392 aa14.72□□□□□ -0.05
SMC6-206ENST00000446852 RELL2Q8NC24 303 aaPredicted RBP14.72□□□□□ -0.05
SMC6-206ENST00000446852 OR10J5Q8NHC4 309 aa14.72□□□□□ -0.05
SMC6-206ENST00000446852 IL1F10Q8WWZ1 152 aa14.72□□□□□ -0.05
SMC6-206ENST00000446852 CNTNAP3BQ96NU0 1288 aa14.72□□□□□ -0.05
SMC6-206ENST00000446852 CNTNAP3Q9BZ76 1288 aa14.72□□□□□ -0.05
SMC6-206ENST00000446852 H7C1Q1 480 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 HSD17B6O14756 317 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 ZNF250P15622 560 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 RND3P61587 244 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 C3orf36Q3SXR2 165 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 GFRALQ6UXV0 394 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 MEX3BQ6ZN04 569 aaKnown RBP14.71□□□□□ -0.05
SMC6-206ENST00000446852 MOB1BQ7L9L4 216 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 LGI3Q8N145 548 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 OR2Z1Q8NG97 314 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 TMEM222Q9H0R3 208 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 ICE1Q9Y2F5 2266 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 ZZEF1O43149 2961 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 PTBP3O95758 552 aaKnown RBP14.71□□□□□ -0.05
SMC6-206ENST00000446852 FAM87AP0C7U9 286 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 FAM74A1Q5RGS3 127 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 FIP1L1Q6UN15 594 aaKnown RBP14.71□□□□□ -0.05
SMC6-206ENST00000446852 PRR18Q8N4B5 295 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 SLC35G3Q8N808 338 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 UBALD1Q8TB05 177 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 SNRNP40Q96DI7 357 aaKnown RBP14.71□□□□□ -0.05
SMC6-206ENST00000446852 AQP10Q96PS8 301 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 USB1Q9BQ65 265 aaKnown RBP14.71□□□□□ -0.05
SMC6-206ENST00000446852 TAAR3PQ9P1P4 343 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 SH3BGRL2Q9UJC5 107 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 TRAPPC2LQ9UL33 140 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 OR2W1Q9Y3N9 320 aa14.71□□□□□ -0.05
SMC6-206ENST00000446852 ZSCAN5BA6NJL1 495 aa14.7□□□□□ -0.06
SMC6-206ENST00000446852 ATP6V1G2-DDX39BF2Z307 99 aa14.7□□□□□ -0.06
SMC6-206ENST00000446852 LMO1P25800 156 aa14.7□□□□□ -0.06
SMC6-206ENST00000446852 MBNL3Q9NUK0 354 aaKnown RBP14.7□□□□□ -0.06
SMC6-206ENST00000446852 SMG1Q96Q15 3661 aaKnown RBP14.7□□□□□ -0.06
SMC6-206ENST00000446852 hCG_1807616A0A1W2PRN6 198 aa14.7□□□□□ -0.06
SMC6-206ENST00000446852 NPIPB11E5RHQ5 1161 aa14.7□□□□□ -0.06
SMC6-206ENST00000446852 IGHV3-13P01766 116 aa14.7□□□□□ -0.06
SMC6-206ENST00000446852 GLRXP35754 106 aa14.7□□□□□ -0.06
SMC6-206ENST00000446852 CYTL1Q9NRR1 136 aa14.7□□□□□ -0.06
SMC6-206ENST00000446852 WIPI2Q9Y4P8 454 aa14.7□□□□□ -0.06
SMC6-206ENST00000446852 ADGRG4Q8IZF6 3080 aa14.7□□□□□ -0.06
SMC6-206ENST00000446852 DEDDO75618 318 aa14.69□□□□□ -0.06
SMC6-206ENST00000446852 TMEM268Q5VZI3 342 aa14.69□□□□□ -0.06
SMC6-206ENST00000446852 VHLLQ6RSH7 139 aa14.69□□□□□ -0.06
SMC6-206ENST00000446852 TMEM171Q8WVE6 324 aa14.69□□□□□ -0.06
SMC6-206ENST00000446852 ASF1BQ9NVP2 202 aa14.69□□□□□ -0.06
SMC6-206ENST00000446852 ERRFI1Q9UJM3 462 aaPredicted RBP14.69□□□□□ -0.06
SMC6-206ENST00000446852 SCGB1D2O95969 90 aa14.69□□□□□ -0.06
SMC6-206ENST00000446852 MBPP02686 304 aaPredicted RBP14.69□□□□□ -0.06
SMC6-206ENST00000446852 SPRNQ5BIV9 151 aa14.69□□□□□ -0.06
SMC6-206ENST00000446852 TOR2AQ5JU69 321 aa14.69□□□□□ -0.06
SMC6-206ENST00000446852 MRGPRGQ86SM5 289 aa14.69□□□□□ -0.06
SMC6-206ENST00000446852 OR52M1Q8NGK5 317 aa14.69□□□□□ -0.06
SMC6-206ENST00000446852 DNAJB11Q9UBS4 358 aa14.69□□□□□ -0.06
SMC6-206ENST00000446852 METRNQ9UJH8 293 aa14.69□□□□□ -0.06
SMC6-206ENST00000446852 FBXO9Q9UK97 447 aaPredicted RBP14.69□□□□□ -0.06
SMC6-206ENST00000446852 ZNF835Q9Y2P0 537 aa14.69□□□□□ -0.06
SMC6-206ENST00000446852 LSM5Q9Y4Y9 91 aaKnown RBP14.69□□□□□ -0.06
SMC6-206ENST00000446852 TNFSF12O43508 249 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 KLF3P57682 345 aaPredicted RBP14.68□□□□□ -0.06
SMC6-206ENST00000446852 TESK1Q15569 626 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 HMGN3Q15651 99 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 TMEM56Q96MV1 263 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 PIGMQ9H3S5 423 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 TAF9BQ9HBM6 251 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 UBE2J1Q9Y385 318 aaPredicted RBP14.68□□□□□ -0.06
SMC6-206ENST00000446852 SPEF1Q9Y4P9 236 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 TMEM56-RWDD3S4R434 201 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 CACNA1DQ01668 2161 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 KALRNO60229 2985 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 HKR1P10072 659 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 NUP62P37198 522 aaPredicted RBP14.68□□□□□ -0.06
SMC6-206ENST00000446852 CD200P41217 278 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 AANATQ16613 207 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 LILRB1Q8NHL6 650 aaPredicted RBP14.68□□□□□ -0.06
SMC6-206ENST00000446852 STOML3Q8TAV4 291 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 LRRC29Q8WV35 223 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 PHYHIPLQ96FC7 376 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 REG4Q9BYZ8 158 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 PARP12Q9H0J9 701 aaKnown RBP14.68□□□□□ -0.06
SMC6-206ENST00000446852 TMED3Q9Y3Q3 217 aa14.68□□□□□ -0.06
SMC6-206ENST00000446852 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.67□□□□□ -0.06
SMC6-206ENST00000446852 SRPXP78539 464 aa14.67□□□□□ -0.06
SMC6-206ENST00000446852 SMIM21Q3B7S5 101 aa14.67□□□□□ -0.06
SMC6-206ENST00000446852 CMTM1Q8IZ96 169 aa14.67□□□□□ -0.06
SMC6-206ENST00000446852 PRR7Q8TB68 274 aa14.67□□□□□ -0.06
SMC6-206ENST00000446852 COQ2Q96H96 371 aa14.67□□□□□ -0.06
SMC6-206ENST00000446852 SHARPINQ9H0F6 387 aa14.67□□□□□ -0.06
SMC6-206ENST00000446852 GLS2Q9UI32 602 aa14.67□□□□□ -0.06
SMC6-206ENST00000446852 IGLV3-9A0A075B6K5 115 aa14.67□□□□□ -0.06
SMC6-206ENST00000446852 TEX46H3BTG2 121 aa14.67□□□□□ -0.06
SMC6-206ENST00000446852 PGLYRP1O75594 196 aaPredicted RBP14.67□□□□□ -0.06
SMC6-206ENST00000446852 EGR1P18146 543 aa14.67□□□□□ -0.06
SMC6-206ENST00000446852 AESQ08117 197 aa14.67□□□□□ -0.06
SMC6-206ENST00000446852 PDZD9Q8IXQ8 264 aa14.67□□□□□ -0.06
SMC6-206ENST00000446852 BVESQ8NE79 360 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms