RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 IFT46Q9NQC8 304 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 OR1A1Q9P1Q5 309 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 KLK11Q9UBX7 282 aa6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 ANKRD17O75179 2603 aaKnown RBP6.23□□□□□ -1.41
SF3A3P1-201ENST00000446317 C12orf77C9JDV5 145 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 BET1O15155 118 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 TGFAP01135 160 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 PRSS3P35030 304 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 RBM39Q14498 530 aaKnown RBP6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 BAK1Q16611 211 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 TMEM249Q2WGJ8 235 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 IGSF11Q5DX21 431 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 SPANXN2Q5MJ10 180 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 ATPAF1Q5TC12 328 aaPredicted RBP6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 HACD4Q5VWC8 232 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 SHEQ5VZ18 495 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 Q6ZNX1 250 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 LINC00596Q86U02 117 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 ARL11Q969Q4 196 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 PTX4Q96A99 478 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 RAB39BQ96DA2 213 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 KIRREL1Q96J84 757 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 GSX1Q9H4S2 264 aaPredicted RBP6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 TAF9BQ9HBM6 251 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 AKIP1Q9NQ31 210 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 HIF1ANQ9NWT6 349 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 RPUSD1Q9UJJ7 312 aaKnown RBP6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 OTOGQ6ZRI0 2925 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 SPG11Q96JI7 2443 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 TRGV10A0A0A0MS01 117 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 NDUFA2O43678 99 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 TSPAN9O75954 239 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 HBZP02008 142 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 LMO1P25800 156 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 PPP1CCP36873 323 aaKnown RBP6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 C17orf58Q2M2W7 97 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 LINC01559Q495D7 138 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 PLA1AQ53H76 456 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 RUSC1-AS1Q66K80 236 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 ZNF57Q68EA5 555 aaPredicted RBP6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 SLC35E4Q6ICL7 350 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 GLCCI1Q86VQ1 547 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 OR4D10Q8NGI6 311 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 PPP1R35Q8TAP8 253 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 FCAMRQ8WWV6 532 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 C22orf15Q8WYQ4 148 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 SNAPC3Q92966 411 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 LHX4Q969G2 390 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 WDFY2Q96P53 400 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 SDHCQ99643 169 aaPredicted RBP6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 MRI1Q9BV20 369 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 RHOFQ9HBH0 211 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 SPACA1Q9HBV2 294 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 C12orf4Q9NQ89 552 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 ABCB10Q9NRK6 738 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 CALYQ9NYX4 217 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 KAAG1Q9UBP8 84 aa6.22□□□□□ -1.41
SF3A3P1-201ENST00000446317 PRRC2AP48634 2157 aaKnown RBP6.21□□□□□ -1.41
SF3A3P1-201ENST00000446317 MAST4O15021 2626 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 IGHV2-70DA0A0C4DH43 119 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 IGKV1-6A0A0C4DH72 117 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 FAM90A10PA6NDY2 464 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 FAM90A18PA6NE21 464 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 FAM90A16PA6NEW6 464 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 FAM90A20PA6NIJ5 464 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 FAM90A8PA6NJQ4 464 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 FAM90A7PA6NKC0 464 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 FAM90A22PA8MWA6 464 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 FAM90A12PA8MX19 464 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 FAM90A5PA8MXJ8 464 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 FAM90A23PA8MXZ1 464 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 SLC31A2O15432 143 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 AVPP01185 164 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 HEXAP06865 529 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 MSMBP08118 114 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 GSTP1P09211 210 aaKnown RBP6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 FAM90A15PP0C7V4 464 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 FAM90A13PP0C7W8 464 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 FAM90A14PP0C7W9 464 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 FAM90A24PP0C7X0 464 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 NFYAP23511 347 aaPredicted RBP6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 RFX2P48378 723 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 DVL1P1P54792 670 aaPredicted RBP6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 SCAND1P57086 179 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 HLA-DRB3P79483 266 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 LOXL1Q08397 574 aaPredicted RBP6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 DCAF12L2Q5VW00 463 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 PYHIN1Q6K0P9 492 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 VMO1Q7Z5L0 202 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 Q8N402 240 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 Q8N7P7 452 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 LINC01356Q8N9X3 169 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 OR5D13Q8NGL4 314 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 ZNF714Q96N38 554 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 GPHA2Q96T91 129 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 TINAGL1Q9GZM7 467 aaPredicted RBP6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 SRRQ9GZT4 340 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 IFT22Q9H7X7 185 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 Q9N2K0 584 aa6.21□□□□□ -1.42
SF3A3P1-201ENST00000446317 YAE1D1Q9NRH1 226 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms