RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 UBALD1Q8TB05 177 aa14.17□□□□□ -0.14
LIME1-202ENST00000444951 MRPL30Q8TCC3 161 aaKnown RBP14.17□□□□□ -0.14
LIME1-202ENST00000444951 MAFIPQ8WZ33 124 aa14.17□□□□□ -0.14
LIME1-202ENST00000444951 TMEM186Q96B77 213 aa14.17□□□□□ -0.14
LIME1-202ENST00000444951 C12orf4Q9NQ89 552 aa14.17□□□□□ -0.14
LIME1-202ENST00000444951 TRAV20A0A0B4J274 112 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 A0A0G2JMP0 313 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 A0A0X1KG70 313 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 MEIS3P1A6NDR6 274 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 SERPINE3A8MV23 424 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 FCER2P06734 321 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 RCC1P18754 421 aaPredicted RBP14.16□□□□□ -0.14
LIME1-202ENST00000444951 DVL1P1P54792 670 aaPredicted RBP14.16□□□□□ -0.14
LIME1-202ENST00000444951 GUCA2AQ02747 115 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 MEF2CQ06413 473 aaPredicted RBP14.16□□□□□ -0.14
LIME1-202ENST00000444951 IL18Q14116 193 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 DCAF12L2Q5VW00 463 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 FAHD2BQ6P2I3 314 aaPredicted RBP14.16□□□□□ -0.14
LIME1-202ENST00000444951 BTNL3Q6UXE8 466 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 TCF23Q7RTU1 214 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 C5orf24Q7Z6I8 188 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 PRR18Q8N4B5 295 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 LY6G5BQ8NDX9 201 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 OR4M2Q8NGB6 313 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 FAHD2AQ96GK7 314 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 OR6C3Q9NZP0 311 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 ZNF230Q9UIE0 474 aaPredicted RBP14.16□□□□□ -0.14
LIME1-202ENST00000444951 ARHGAP32A7KAX9 2087 aa14.16□□□□□ -0.14
LIME1-202ENST00000444951 KIR2DS1A0A191URI9 304 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 FABP12A6NFH5 140 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 CA11O75493 328 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 HLA-DQB1P01920 261 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 ERVFRD-1P60508 538 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 PAX2Q02962 417 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 PRB3Q04118 309 aaPredicted RBP14.15□□□□□ -0.14
LIME1-202ENST00000444951 LTC4SQ16873 150 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 PNLIPRP3Q17RR3 467 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 FAM131AQ6UXB0 335 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 ZNF565Q8N9K5 539 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 RFESDQ8TAC1 157 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 C8orf46Q8TAG6 207 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 ZNF714Q96N38 554 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 WDFY2Q96P53 400 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.15□□□□□ -0.14
LIME1-202ENST00000444951 POLR3KQ9Y2Y1 108 aaPredicted RBP14.15□□□□□ -0.14
LIME1-202ENST00000444951 INSIG2Q9Y5U4 225 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 LINC00312Q9Y6C7 94 aa14.15□□□□□ -0.14
LIME1-202ENST00000444951 A0A1W2PPH5 198 aa14.14□□□□□ -0.15
LIME1-202ENST00000444951 MEIOCA2RUB1 952 aa14.14□□□□□ -0.15
LIME1-202ENST00000444951 SSX5O60225 188 aa14.14□□□□□ -0.15
LIME1-202ENST00000444951 NAPSAO96009 420 aa14.14□□□□□ -0.15
LIME1-202ENST00000444951 ZNF728P0DKX0 622 aa14.14□□□□□ -0.15
LIME1-202ENST00000444951 PRSS3P35030 304 aa14.14□□□□□ -0.15
LIME1-202ENST00000444951 Q6ZPA2 131 aa14.14□□□□□ -0.15
LIME1-202ENST00000444951 ST6GALNAC5Q9BVH7 336 aa14.14□□□□□ -0.15
LIME1-202ENST00000444951 RIMS4Q9H426 269 aaPredicted RBP14.14□□□□□ -0.15
LIME1-202ENST00000444951 KCNIP1Q9NZI2 227 aa14.14□□□□□ -0.15
LIME1-202ENST00000444951 UBE2J1Q9Y385 318 aaPredicted RBP14.14□□□□□ -0.15
LIME1-202ENST00000444951 DOCK11Q5JSL3 2073 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 FCGR3AP08637 254 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 OMGP23515 440 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 SSTR5P35346 364 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 DLX1P56177 255 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 PAX5Q02548 391 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 C11orf91Q3C1V1 193 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 SPANXN2Q5MJ10 180 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 PRAMEF5Q5TYX0 476 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 METTL11BQ5VVY1 283 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 BAIAP2L2Q6UXY1 529 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 GAPTQ8N292 157 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 ARL11Q969Q4 196 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 DACT3Q96B18 629 aaPredicted RBP14.13□□□□□ -0.15
LIME1-202ENST00000444951 ABHD1Q96SE0 405 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 PCGF1Q9BSM1 259 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 GAL3ST2Q9H3Q3 398 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 CALYQ9NYX4 217 aa14.13□□□□□ -0.15
LIME1-202ENST00000444951 C12orf77C9JDV5 145 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 MELTFP08582 738 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 HNF1AP20823 631 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 PITPNAQ00169 270 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 PYDC2Q56P42 97 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 C6orf183Q5T699 404 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 ZNF782Q6ZMW2 699 aaPredicted RBP14.12□□□□□ -0.15
LIME1-202ENST00000444951 CCDC190Q86UF4 302 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 GVQW1Q8N7I0 195 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 OR1L1Q8NH94 360 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 CORO2AQ92828 525 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 NCOR1P1Q9H4R4 102 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 C7orf69Q9H7B7 122 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 TAF9BQ9HBM6 251 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 Q9N2K0 584 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 IFT46Q9NQC8 304 aa14.12□□□□□ -0.15
LIME1-202ENST00000444951 KBTBD11-OT1A0A1B0GTJ5 212 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 FAM172BPA6NC97 362 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 ZNF729A6NN14 1252 aaPredicted RBP14.11□□□□□ -0.15
LIME1-202ENST00000444951 MMP23AO75900 390 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 TOX4O94842 621 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 GZMHP20718 246 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 NFYBP25208 207 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 DLX6P56179 175 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms