RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 PRSS54Q6PEW0 395 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TEX261Q6UWH6 196 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 CLEC18BQ6UXF7 455 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF788Q6ZQV5 615 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 LIAT1Q6ZQX7 453 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 Q6ZR03 302 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 NLRC3Q7RTR2 1065 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 WDR86Q86TI4 376 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF546Q86UE3 836 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 SLC51BQ86UW2 128 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 PUSL1Q8N0Z8 303 aaKnown RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 C9orf62Q8N4C0 152 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 KCNRGQ8N5I3 272 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 EIF4E3Q8N5X7 224 aaKnown RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 LINC00311Q8N616 119 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 GCSAMQ8N6F7 178 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 INO80EQ8NBZ0 244 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 RELL2Q8NC24 303 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 OR4S1Q8NGB4 309 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 OR5D18Q8NGL1 313 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 OR10K1Q8NGX5 313 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ANGPTL6Q8NI99 470 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 STOML3Q8TAV4 291 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 THAP6Q8TBB0 222 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF596Q8TC21 504 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 MARCH1Q8TCQ1 289 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 GLYATL2Q8WU03 294 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 PPP1R1CQ8WVI7 109 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 NEU4Q8WWR8 484 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 RTN4IP1Q8WWV3 396 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 GCDHQ92947 438 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TNFRSF14Q92956 283 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 DVL3Q92997 716 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TMEM230Q96A57 120 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 MSI2Q96DH6 328 aaKnown RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ELMOD3Q96FG2 381 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ADTRPQ96IZ2 230 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 MEGF10Q96KG7 1140 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 AQP10Q96PS8 301 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 OR2V2Q96R30 315 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 HSD17B10Q99714 261 aaKnown RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TMEM246Q9BRR3 403 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF2Q9BSG1 426 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ST6GALNAC5Q9BVH7 336 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 GSX2Q9BZM3 304 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 SHARPINQ9H0F6 387 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TMEM222Q9H0R3 208 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 SMDT1Q9H4I9 107 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF665Q9H7R5 613 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 NAA60Q9H7X0 242 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 PLEKHF2Q9H8W4 249 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ZMAT3Q9HA38 289 aaKnown RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 CHMP1AQ9HD42 196 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 GCM1Q9NP62 436 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 LIN7CQ9NUP9 197 aaKnown RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF701Q9NV72 531 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 RNF7Q9UBF6 113 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ERRFI1Q9UJM3 462 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF222Q9UK12 451 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ELF5Q9UKW6 265 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TNFSF18Q9UNG2 199 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 FLVCR2Q9UPI3 526 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 RAXQ9Y2V3 346 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 MAB21L2Q9Y586 359 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 U3KQ87 197 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ANKRD11Q6UB99 2663 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 MGAQ8IWI9 3026 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ACACAQ13085 2346 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 CHD3Q12873 2000 aaKnown RBP2.37□□□□□ -2.03
LINC00393-201ENST00000443621 CACNA1AO00555 2505 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 RTTNQ86VV8 2226 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 BOD1L1Q8NFC6 3051 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 POLEQ07864 2286 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 C3orf85A0A1B0GTC6 90 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 hADV38S2A0JD32 116 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 ODAMA1E959 279 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 FAM221AA4D161 298 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 MEIS3P1A6NDR6 274 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 DPRXA6NFQ7 191 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 SHISA9B4DS77 424 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 EEF1E1-BLOC1S5C9J1V9 151 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 E5RGE8 158 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 F8VVB4 439 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 F8VWA3 439 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 INS-IGF2F8WCM5 200 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 G3V3Q6 166 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 H3BSH0 61 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 L7N2F9 121 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 M0R1B8 84 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 LGALS8O00214 317 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 CCL21O00585 134 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 ABCD4O14678 606 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 SMAD7O15105 426 aaKnown RBP2.37□□□□□ -2.03
LINC00393-201ENST00000443621 SIGLEC5O15389 551 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 ST8SIA5O15466 376 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 ST8SIA3O43173 380 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 LILRA1O75019 489 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 RP2O75695 350 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 RHBDL1O75783 438 aa2.37□□□□□ -2.03
LINC00393-201ENST00000443621 WISP2O76076 250 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms