RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 C11orf53Q8IXP5 236 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 H1FOOQ8IZA3 346 aaPredicted RBP5.08□□□□□ -1.6
VPS50-205ENST00000441602 GAPTQ8N292 157 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 PLPPR1Q8TBJ4 325 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 MRGPRFQ96AM1 343 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 WFIKKN1Q96NZ8 548 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 ARL6Q9H0F7 186 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 ZNF665Q9H7R5 613 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 TAF9BQ9HBM6 251 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 KIF25Q9UIL4 384 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 PPP1R3CQ9UQK1 317 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 BOLA1Q9Y3E2 137 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 MAB21L2Q9Y586 359 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 MYO7BQ6PIF6 2116 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 TRAV38-1A0A0B4J264 116 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 C17orf100A8MU93 164 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 LGALS8O00214 317 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 MUC1P15941 1255 aaPredicted RBP5.08□□□□□ -1.6
VPS50-205ENST00000441602 PVALBP20472 110 aaPredicted RBP5.08□□□□□ -1.6
VPS50-205ENST00000441602 GNRHRP30968 328 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 APOBEC3AP31941 199 aaPredicted RBP5.08□□□□□ -1.6
VPS50-205ENST00000441602 H2BFSP57053 126 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 UBA52P62987 128 aaKnown RBP5.08□□□□□ -1.6
VPS50-205ENST00000441602 IAH1Q2TAA2 248 aaPredicted RBP5.08□□□□□ -1.6
VPS50-205ENST00000441602 DCAF12L2Q5VW00 463 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 GCSAMQ8N6F7 178 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 KDF1Q8NAX2 398 aaPredicted RBP5.08□□□□□ -1.6
VPS50-205ENST00000441602 EDARADDQ8WWZ3 215 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 IL22RA2Q969J5 263 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 PLPPR2Q96GM1 343 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 SEC22AQ96IW7 307 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 MBNL3Q9NUK0 354 aaKnown RBP5.08□□□□□ -1.6
VPS50-205ENST00000441602 LIN7CQ9NUP9 197 aaKnown RBP5.08□□□□□ -1.6
VPS50-205ENST00000441602 UBQLN2Q9UHD9 624 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 CUL9Q8IWT3 2517 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 C3orf85A0A1B0GTC6 90 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 TUBAL3A6NHL2 446 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 DBX1A6NMT0 343 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 WNT9BO14905 357 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 SERPINE2P07093 398 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 THBDP07204 575 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 OR3A1P47881 315 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 S100A10P60903 97 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 LY6G6FQ5SQ64 297 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 ACOT7LQ6ZUV0 252 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 TMUB2Q71RG4 321 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 SLC51BQ86UW2 128 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 ZNF808Q8N4W9 903 aaPredicted RBP5.07□□□□□ -1.6
VPS50-205ENST00000441602 ZNF561Q8N587 486 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 LRTM2Q8N967 370 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 PPP1R1CQ8WVI7 109 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 DCUN1D4Q92564 292 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 RAB39BQ96DA2 213 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 WDR89Q96FK6 387 aaPredicted RBP5.07□□□□□ -1.6
VPS50-205ENST00000441602 FAM234AQ9H0X4 552 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 PLEKHF2Q9H8W4 249 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 PLSCR3Q9NRY6 295 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 GSKIPQ9P0R6 139 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 LPAR3Q9UBY5 353 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 WDR87Q6ZQQ6 2873 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 HSD17B6O14756 317 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 OR5AC1P0C628 307 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 PSG2P11465 335 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 CD80P33681 288 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 AP2S1P53680 142 aaPredicted RBP5.07□□□□□ -1.6
VPS50-205ENST00000441602 PAX5Q02548 391 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 EDDM3AQ14507 147 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 ZNF345Q14585 488 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 TMEM187Q14656 261 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 ADIPOQQ15848 244 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 C2orf68Q2NKX9 166 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 ANKRD55Q3KP44 614 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 LRRC37A5PQ49AS3 106 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 ADAM5Q6NVV9 412 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 PRSS54Q6PEW0 395 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 TCTEX1D1Q8N7M0 179 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 ABHD14BQ96IU4 210 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 SAP30LQ9HAJ7 183 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 RDH8Q9NYR8 311 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 PTPRQQ9UMZ3 2332 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 H0Y980 276 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 WRBO00258 174 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 MPC2O95563 127 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 RCC1P18754 421 aaPredicted RBP5.07□□□□□ -1.6
VPS50-205ENST00000441602 S100A1P23297 94 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 SUPT4H1P63272 117 aaKnown RBP5.07□□□□□ -1.6
VPS50-205ENST00000441602 EFNB3Q15768 340 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 LGALSLQ3ZCW2 172 aaPredicted RBP5.07□□□□□ -1.6
VPS50-205ENST00000441602 GGNBP1Q5YKI7 109 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 LAMTOR1Q6IAA8 161 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 MEX3BQ6ZN04 569 aaKnown RBP5.07□□□□□ -1.6
VPS50-205ENST00000441602 TBC1D26Q86UD7 250 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 PRR18Q8N4B5 295 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 GALNT11Q8NCW6 608 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 OR11H4Q8NGC9 324 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 ARL11Q969Q4 196 aa5.07□□□□□ -1.6
VPS50-205ENST00000441602 TRGV10A0A0A0MS01 117 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 ODAMA1E959 279 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 CDS2O95674 445 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 RPS2P15880 293 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms