RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 MRPL41Q8IXM3 137 aaKnown RBP17.44■□□□□ 0.38
SHOX2-203ENST00000441443 ELOVL1Q9BW60 279 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 CHD3Q12873 2000 aaKnown RBP17.44■□□□□ 0.38
SHOX2-203ENST00000441443 FAM186AA6NE01 2351 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 TRAV1-1A0A0B4J248 108 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 OR7C1O76099 320 aaPredicted RBP17.44■□□□□ 0.38
SHOX2-203ENST00000441443 GCGP01275 180 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 PFN1P07737 140 aaKnown RBP17.44■□□□□ 0.38
SHOX2-203ENST00000441443 RTP5Q14D33 572 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 TEX38Q6PEX7 206 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 DPPA3Q6W0C5 159 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 OR10G3Q8NGC4 313 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 DNASE2BQ8WZ79 361 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 PCGF1Q9BSM1 259 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 RBKSQ9H477 322 aa17.44■□□□□ 0.38
SHOX2-203ENST00000441443 TLX3O43711 291 aaPredicted RBP17.43■□□□□ 0.38
SHOX2-203ENST00000441443 MALLQ13021 153 aa17.43■□□□□ 0.38
SHOX2-203ENST00000441443 HNF4GQ14541 408 aa17.43■□□□□ 0.38
SHOX2-203ENST00000441443 NMSQ5H8A3 153 aa17.43■□□□□ 0.38
SHOX2-203ENST00000441443 SMIM7Q9BQ49 75 aa17.43■□□□□ 0.38
SHOX2-203ENST00000441443 METTL7AQ9H8H3 244 aa17.43■□□□□ 0.38
SHOX2-203ENST00000441443 GPR179Q6PRD1 2367 aa17.43■□□□□ 0.38
SHOX2-203ENST00000441443 IL24Q13007 206 aa17.43■□□□□ 0.38
SHOX2-203ENST00000441443 NCR3LG1Q68D85 454 aa17.43■□□□□ 0.38
SHOX2-203ENST00000441443 SPSB1Q96BD6 273 aa17.43■□□□□ 0.38
SHOX2-203ENST00000441443 ZNF837Q96EG3 531 aaPredicted RBP17.43■□□□□ 0.38
SHOX2-203ENST00000441443 Q9N2K0 584 aa17.43■□□□□ 0.38
SHOX2-203ENST00000441443 A0A1W2PPQ1 181 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 PPP5D1E7EU14 171 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 TK1P04183 234 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 CXCL12P48061 93 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 SLC25A26Q70HW3 274 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 ZNF385AQ96PM9 386 aaKnown RBP17.42■□□□□ 0.38
SHOX2-203ENST00000441443 CTDSP1Q9GZU7 261 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 FUT9Q9Y231 359 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 RNF115Q9Y4L5 304 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 COL5A1P20908 1838 aaPredicted RBP17.42■□□□□ 0.38
SHOX2-203ENST00000441443 KNTC1P50748 2209 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 IGKV1D-13A0A0B4J2D9 117 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 TRBV11-1A0A0K0K1C0 115 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 IGKV1-13P0DP09 117 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 NUBP1P53384 320 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 GNB2P62879 340 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 OR2V1Q8NHB1 315 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 ADGRG7Q96K78 797 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 AKIRIN1Q9H9L7 192 aaPredicted RBP17.42■□□□□ 0.38
SHOX2-203ENST00000441443 TAAR3PQ9P1P4 343 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 PDCD6O75340 191 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 VDAC1P21796 283 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 SHBQ15464 509 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 SPEM1Q8N4L4 309 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 NABP1Q96AH0 204 aa17.42■□□□□ 0.38
SHOX2-203ENST00000441443 RPUSD4Q96CM3 377 aaKnown RBP17.42■□□□□ 0.38
SHOX2-203ENST00000441443 A0A0G2JRQ6 117 aa17.41■□□□□ 0.38
SHOX2-203ENST00000441443 TCN2P20062 427 aa17.41■□□□□ 0.38
SHOX2-203ENST00000441443 GALR1P47211 349 aa17.41■□□□□ 0.38
SHOX2-203ENST00000441443 MAML2Q8IZL2 1156 aaPredicted RBP17.41■□□□□ 0.38
SHOX2-203ENST00000441443 HIPK2Q9H2X6 1198 aa17.41■□□□□ 0.38
SHOX2-203ENST00000441443 ETV2O00321 342 aaPredicted RBP17.41■□□□□ 0.38
SHOX2-203ENST00000441443 OTX1P32242 354 aaPredicted RBP17.41■□□□□ 0.38
SHOX2-203ENST00000441443 LRP11Q86VZ4 500 aa17.41■□□□□ 0.38
SHOX2-203ENST00000441443 ADPRHL1Q8NDY3 354 aa17.41■□□□□ 0.38
SHOX2-203ENST00000441443 CCL28Q9NRJ3 127 aa17.41■□□□□ 0.38
SHOX2-203ENST00000441443 PRSS50Q9UI38 385 aa17.41■□□□□ 0.38
SHOX2-203ENST00000441443 CEP192Q8TEP8 1941 aa17.41■□□□□ 0.38
SHOX2-203ENST00000441443 AQP7P3A6NL99 342 aa17.4■□□□□ 0.38
SHOX2-203ENST00000441443 SCRG1O75711 98 aa17.4■□□□□ 0.38
SHOX2-203ENST00000441443 FGF5P12034 268 aa17.4■□□□□ 0.38
SHOX2-203ENST00000441443 ELLP55199 621 aaPredicted RBP17.4■□□□□ 0.38
SHOX2-203ENST00000441443 FAM185AQ8N0U4 392 aa17.4■□□□□ 0.38
SHOX2-203ENST00000441443 OR51G1Q8NGK1 321 aa17.4■□□□□ 0.38
SHOX2-203ENST00000441443 SCGB1C1Q8TD33 95 aa17.4■□□□□ 0.38
SHOX2-203ENST00000441443 SPTSSAQ969W0 71 aa17.4■□□□□ 0.38
SHOX2-203ENST00000441443 VAX2Q9UIW0 290 aa17.4■□□□□ 0.38
SHOX2-203ENST00000441443 ARHGAP21Q5T5U3 1957 aa17.4■□□□□ 0.38
SHOX2-203ENST00000441443 HMGB3O15347 200 aaKnown RBP17.4■□□□□ 0.38
SHOX2-203ENST00000441443 SCTP09683 121 aa17.4■□□□□ 0.38
SHOX2-203ENST00000441443 CNN3Q15417 329 aaKnown RBP17.4■□□□□ 0.38
SHOX2-203ENST00000441443 COA6Q5JTJ3 125 aaKnown RBP17.4■□□□□ 0.38
SHOX2-203ENST00000441443 C10orf35Q96D05 121 aa17.4■□□□□ 0.38
SHOX2-203ENST00000441443 SCGB1D1O95968 90 aa17.39■□□□□ 0.38
SHOX2-203ENST00000441443 NRASP01111 189 aa17.39■□□□□ 0.38
SHOX2-203ENST00000441443 LCATP04180 440 aa17.39■□□□□ 0.38
SHOX2-203ENST00000441443 PTGDSP41222 190 aa17.39■□□□□ 0.38
SHOX2-203ENST00000441443 RAB35Q15286 201 aa17.39■□□□□ 0.38
SHOX2-203ENST00000441443 ZNF295-AS1Q8N0V1 137 aa17.39■□□□□ 0.38
SHOX2-203ENST00000441443 CHRNA10Q9GZZ6 450 aa17.39■□□□□ 0.38
SHOX2-203ENST00000441443 PLK3Q9H4B4 646 aa17.39■□□□□ 0.38
SHOX2-203ENST00000441443 M0R143 59 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 HSPB6O14558 160 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 GPR137CQ8N3F9 429 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 HLA-CQ95604 372 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 TMEM18Q96B42 140 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 NAT8Q9UHE5 227 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 PTRH2Q9Y3E5 179 aaKnown RBP17.39■□□□□ 0.37
SHOX2-203ENST00000441443 H7BYZ3 331 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 METTL15P1P0C7V9 234 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 PATE4P0C8F1 98 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 SFTPCP11686 197 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 NPBWR2P48146 333 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms