RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 FAM216AQ8WUB2 273 aa10.15□□□□□ -0.78
SMPD4-209ENST00000439886 TMEM171Q8WVE6 324 aa10.15□□□□□ -0.78
SMPD4-209ENST00000439886 C1orf147Q96MC9 270 aaPredicted RBP10.15□□□□□ -0.78
SMPD4-209ENST00000439886 CALHM2Q9HA72 323 aa10.15□□□□□ -0.78
SMPD4-209ENST00000439886 P4HTMQ9NXG6 502 aa10.15□□□□□ -0.78
SMPD4-209ENST00000439886 C3orf85A0A1B0GTC6 90 aa10.15□□□□□ -0.78
SMPD4-209ENST00000439886 NPIPA2E9PIF3 369 aa10.15□□□□□ -0.78
SMPD4-209ENST00000439886 SPSB3Q6PJ21 355 aa10.15□□□□□ -0.78
SMPD4-209ENST00000439886 IL1F10Q8WWZ1 152 aa10.15□□□□□ -0.78
SMPD4-209ENST00000439886 MRGPRX1Q96LB2 322 aa10.15□□□□□ -0.78
SMPD4-209ENST00000439886 PATZ1Q9HBE1 687 aaKnown RBP10.15□□□□□ -0.78
SMPD4-209ENST00000439886 ST3GAL6Q9Y274 331 aa10.15□□□□□ -0.78
SMPD4-209ENST00000439886 CLDN16Q9Y5I7 305 aa10.15□□□□□ -0.78
SMPD4-209ENST00000439886 NCOA6Q14686 2063 aaPredicted RBP10.15□□□□□ -0.78
SMPD4-209ENST00000439886 SEMA4FO95754 770 aa10.15□□□□□ -0.79
SMPD4-209ENST00000439886 GZMHP20718 246 aa10.15□□□□□ -0.79
SMPD4-209ENST00000439886 COMPP49747 757 aaPredicted RBP10.15□□□□□ -0.79
SMPD4-209ENST00000439886 NUP210LQ5VU65 1888 aa10.15□□□□□ -0.79
SMPD4-209ENST00000439886 C16orf82Q7Z2V1 217 aa10.15□□□□□ -0.79
SMPD4-209ENST00000439886 GNPNAT1Q96EK6 184 aaPredicted RBP10.15□□□□□ -0.79
SMPD4-209ENST00000439886 TECTBQ96PL2 329 aa10.15□□□□□ -0.79
SMPD4-209ENST00000439886 SPIN2AQ99865 258 aa10.15□□□□□ -0.79
SMPD4-209ENST00000439886 SPIN2BQ9BPZ2 258 aa10.15□□□□□ -0.79
SMPD4-209ENST00000439886 THSD7BQ9C0I4 1608 aa10.15□□□□□ -0.79
SMPD4-209ENST00000439886 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-209ENST00000439886 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.14□□□□□ -0.79
SMPD4-209ENST00000439886 PRR19A6NJB7 356 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 RBMXL2O75526 392 aaKnown RBP10.14□□□□□ -0.79
SMPD4-209ENST00000439886 PLA2G5P39877 138 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 CAPZBP47756 277 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 SELENOTP62341 195 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 MALLQ13021 153 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 LYPD6Q86Y78 171 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 LYPD6BQ8NI32 183 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 ZNF721Q8TF20 911 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 TMEM18Q96B42 140 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 ZNF816-ZNF321PA0A0X1KG74 233 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 ECI1P42126 302 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 GALR1P47211 349 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 DCAF7P61962 342 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 PMP22Q01453 160 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 SCGB2A2Q13296 93 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 TRIM61Q5EBN2 209 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 NUFIP2Q7Z417 695 aaKnown RBP10.14□□□□□ -0.79
SMPD4-209ENST00000439886 WFDC8Q8IUA0 241 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 LHX4Q969G2 390 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 ADIPOR1Q96A54 375 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 SLC39A9Q9NUM3 307 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 CLPSP04118 112 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 SUCLG1P53597 346 aaKnown RBP10.14□□□□□ -0.79
SMPD4-209ENST00000439886 C1orf122Q6ZSJ8 110 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 TBC1D26Q86UD7 250 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 OR13D1Q8NGV5 346 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 RNF150Q9ULK6 438 aa10.14□□□□□ -0.79
SMPD4-209ENST00000439886 A0A1W2PNV4 684 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 M0R135 149 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 TRAPPC6AO75865 159 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 FAM3BP58499 235 aaPredicted RBP10.13□□□□□ -0.79
SMPD4-209ENST00000439886 SLC35E3Q7Z769 313 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 OR4F5Q8NH21 305 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 SDSLQ96GA7 329 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 ZNF799Q96GE5 643 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 OR4F4Q96R69 305 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 VSIRQ9H7M9 311 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 RPRMQ9NS64 109 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 HSPB1P04792 205 aaKnown RBP10.13□□□□□ -0.79
SMPD4-209ENST00000439886 SERPINE2P07093 398 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 ZNF133P52736 654 aaPredicted RBP10.13□□□□□ -0.79
SMPD4-209ENST00000439886 SPANXN5Q5MJ07 72 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 TOMM20LQ6UXN7 152 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 TMEM183AQ8IXX5 376 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 SLC22A18ASQ8N1D0 253 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 OR1K1Q8NGR3 316 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 CLDND2Q8NHS1 167 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 KLHDC7BQ96G42 594 aa10.13□□□□□ -0.79
SMPD4-209ENST00000439886 A0A1B0GUS0 222 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 MPPED1O15442 326 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 HPRT1P00492 218 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 GCGP01275 180 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 ZNF17P17021 662 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 VAMP3Q15836 100 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 NOXO1Q8NFA2 376 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 ACTR3CQ9C0K3 210 aaPredicted RBP10.12□□□□□ -0.79
SMPD4-209ENST00000439886 B3GAT1Q9P2W7 334 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 PROB1E7EW31 1015 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 TSPAN2O60636 221 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 OPN1MWP04001 364 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 IL6RP08887 468 aaPredicted RBP10.12□□□□□ -0.79
SMPD4-209ENST00000439886 OPN1MW2P0DN77 364 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 OPN1MW3P0DN78 364 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 KIR2DL1P43626 348 aaPredicted RBP10.12□□□□□ -0.79
SMPD4-209ENST00000439886 BADQ92934 168 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 DOCK7Q96N67 2140 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 MOB1AQ9H8S9 216 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 SLC7A10Q9NS82 523 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 FKBP11Q9NYL4 201 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 PAM16Q9Y3D7 125 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 TRIOO75962 3097 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 LAMA1P25391 3075 aa10.12□□□□□ -0.79
SMPD4-209ENST00000439886 A0A1W2PQF6 199 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms