RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ZNF787Q6DD87 383 aa8.59□□□□□ -1.04
CDC42SE1-202ENST00000439374 SLC25A47Q6Q0C1 308 aa8.59□□□□□ -1.04
CDC42SE1-202ENST00000439374 BTNL3Q6UXE8 466 aa8.59□□□□□ -1.04
CDC42SE1-202ENST00000439374 OR10D3Q8NH80 312 aa8.59□□□□□ -1.04
CDC42SE1-202ENST00000439374 TMEM171Q8WVE6 324 aa8.59□□□□□ -1.04
CDC42SE1-202ENST00000439374 METTL9Q9H1A3 318 aa8.59□□□□□ -1.04
CDC42SE1-202ENST00000439374 SIRT7Q9NRC8 400 aa8.59□□□□□ -1.04
CDC42SE1-202ENST00000439374 IL36RNQ9UBH0 155 aa8.59□□□□□ -1.04
CDC42SE1-202ENST00000439374 OSGIN2Q9Y236 505 aa8.59□□□□□ -1.04
CDC42SE1-202ENST00000439374 ISG15P05161 165 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 FSTP19883 344 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 P2RY1P47900 373 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 SUMO3P55854 103 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 ZP4Q12836 540 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 HMGN3Q15651 99 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 LTC4SQ16873 150 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 C10orf91Q5T1B1 145 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 ETFRF1Q6IPR1 90 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 HIST3H2BBQ8N257 126 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 GATAD1Q8WUU5 269 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 LYZL4Q96KX0 146 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 HIST1H2BLQ99880 126 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 TWSG1Q9GZX9 223 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 ARRDC1-AS1Q9H2J1 176 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 PPP1R3CQ9UQK1 317 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 C5orf49A4QMS7 147 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 NRASP01111 189 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 IGHV3-13P01766 116 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 IGHV3-7P01780 117 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 UMODP07911 640 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 CELA3AP09093 270 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 CYB561P49447 251 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 HLA-DRB3P79483 266 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 ZNF664Q8N3J9 261 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 ZNF488Q96MN9 340 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 DEFB127Q9H1M4 99 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 NAA60Q9H7X0 242 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 FOXD3Q9UJU5 478 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 RNF150Q9ULK6 438 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 NOSIPQ9Y314 301 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 STARD10Q9Y365 291 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 MED13LQ71F56 2210 aa8.58□□□□□ -1.04
CDC42SE1-202ENST00000439374 NUDT19A8MXV4 375 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 DHRS3O75911 302 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 IFNA5P01569 189 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 MELTFP08582 738 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 LIFP15018 202 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 STARD6P59095 220 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 DCAF12Q5T6F0 453 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 ABHD17BQ5VST6 288 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 REC114Q7Z4M0 266 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 FGFBP3Q8TAT2 258 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 DDA1Q9BW61 102 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 RNF122Q9H9V4 155 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 GLRX2Q9NS18 164 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 PCP4P48539 62 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 SCAND1P57086 179 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 PKIAP61925 76 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 COL10A1Q03692 680 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 FAHD2BQ6P2I3 314 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 TMEM105Q8N8V8 129 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 OR4F5Q8NH21 305 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 FAHD2AQ96GK7 314 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 OR4F4Q96R69 305 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 FAM234AQ9H0X4 552 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 UBE2L5PA0A1B0GUS4 154 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 ZIC3O60481 467 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 RPS2P15880 293 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 COL8A2P25067 703 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 SUCLG1P53597 346 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 UCP3P55916 312 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 DSCR4P56555 118 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 SLC35B1P78383 322 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 TOMM20LQ6UXN7 152 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 ZNF100Q8IYN0 542 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 DEFB123Q8N688 67 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 ASB13Q8WXK3 278 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 HIST1H2AAQ96QV6 131 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 OR5B12Q96R08 314 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 FOXB1Q99853 325 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 PLEKHA2Q9HB19 425 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 CCL28Q9NRJ3 127 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 NECAP2Q9NVZ3 263 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 LOXL2Q9Y4K0 774 aa8.57□□□□□ -1.04
CDC42SE1-202ENST00000439374 TRBV6-7A0A0A0MS04 114 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 FIGNL2A6NMB9 653 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 KIAA1324LA8MWY0 1029 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 FAM157AC9JC47 383 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 PPP5D1E7EU14 171 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 WDR1O75083 606 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 SRSF10O75494 262 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 CBR3O75828 277 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 ZNF17P17021 662 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 THBS4P35443 961 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 NPBWR2P48146 333 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 ARF1P84077 181 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 FAM3AP98173 230 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 PNLIPRP3Q17RR3 467 aa8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-202ENST00000439374 GAPTQ8N292 157 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms