RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 CHRFAM7AQ494W8 412 aa17.13■□□□□ 0.33
CHD3-204ENST00000439235 OR52W1Q6IF63 320 aa17.13■□□□□ 0.33
CHD3-204ENST00000439235 BTN2A1Q7KYR7 527 aa17.13■□□□□ 0.33
CHD3-204ENST00000439235 FAM185AQ8N0U4 392 aa17.13■□□□□ 0.33
CHD3-204ENST00000439235 OR13A1Q8NGR1 328 aa17.13■□□□□ 0.33
CHD3-204ENST00000439235 CORO2AQ92828 525 aa17.13■□□□□ 0.33
CHD3-204ENST00000439235 C19orf12Q9NSK7 152 aa17.13■□□□□ 0.33
CHD3-204ENST00000439235 UBE2J1Q9Y385 318 aaPredicted RBP17.13■□□□□ 0.33
CHD3-204ENST00000439235 AKAP6Q13023 2319 aa17.13■□□□□ 0.33
CHD3-204ENST00000439235 TEP1Q99973 2627 aaKnown RBP17.12■□□□□ 0.33
CHD3-204ENST00000439235 TRAV39A0A0B4J263 110 aa17.12■□□□□ 0.33
CHD3-204ENST00000439235 A0A1W2PPH5 198 aa17.12■□□□□ 0.33
CHD3-204ENST00000439235 A8MXK9 166 aa17.12■□□□□ 0.33
CHD3-204ENST00000439235 FABP7O15540 132 aa17.12■□□□□ 0.33
CHD3-204ENST00000439235 HLA-DMAP28067 261 aa17.12■□□□□ 0.33
CHD3-204ENST00000439235 FAUP35544 74 aaKnown RBP17.12■□□□□ 0.33
CHD3-204ENST00000439235 KLF9Q13886 244 aaPredicted RBP17.12■□□□□ 0.33
CHD3-204ENST00000439235 STEAP3Q658P3 488 aa17.12■□□□□ 0.33
CHD3-204ENST00000439235 OR5H2Q8NGV7 314 aa17.12■□□□□ 0.33
CHD3-204ENST00000439235 COX4I2Q96KJ9 171 aa17.12■□□□□ 0.33
CHD3-204ENST00000439235 TAF9BQ9HBM6 251 aa17.12■□□□□ 0.33
CHD3-204ENST00000439235 TAS2R3Q9NYW6 316 aa17.12■□□□□ 0.33
CHD3-204ENST00000439235 OPN4Q9UHM6 478 aa17.12■□□□□ 0.33
CHD3-204ENST00000439235 ZNF729A6NN14 1252 aaPredicted RBP17.11■□□□□ 0.33
CHD3-204ENST00000439235 PHF1O43189 567 aaPredicted RBP17.11■□□□□ 0.33
CHD3-204ENST00000439235 SPINT2O43291 252 aa17.11■□□□□ 0.33
CHD3-204ENST00000439235 FOXH1O75593 365 aa17.11■□□□□ 0.33
CHD3-204ENST00000439235 CD3DP04234 171 aa17.11■□□□□ 0.33
CHD3-204ENST00000439235 AKAIN1P0CW23 69 aa17.11■□□□□ 0.33
CHD3-204ENST00000439235 OR3A3P47888 321 aa17.11■□□□□ 0.33
CHD3-204ENST00000439235 DEFA1P59665 94 aa17.11■□□□□ 0.33
CHD3-204ENST00000439235 DEFA3P59666 94 aa17.11■□□□□ 0.33
CHD3-204ENST00000439235 DYRK1AQ13627 763 aa17.11■□□□□ 0.33
CHD3-204ENST00000439235 RNASE10Q5GAN6 216 aaKnown RBP17.11■□□□□ 0.33
CHD3-204ENST00000439235 STEAP1BQ6NZ63 245 aa17.11■□□□□ 0.33
CHD3-204ENST00000439235 LYSMD2Q8IV50 215 aa17.11■□□□□ 0.33
CHD3-204ENST00000439235 OR5AP2Q8NGF4 316 aa17.11■□□□□ 0.33
CHD3-204ENST00000439235 OR4A4PQ8NGN8 299 aa17.11■□□□□ 0.33
CHD3-204ENST00000439235 C8orf46Q8TAG6 207 aa17.11■□□□□ 0.33
CHD3-204ENST00000439235 C7orf50Q9BRJ6 194 aaKnown RBP17.11■□□□□ 0.33
CHD3-204ENST00000439235 GAL3ST2Q9H3Q3 398 aa17.11■□□□□ 0.33
CHD3-204ENST00000439235 RPUSD1Q9UJJ7 312 aaKnown RBP17.11■□□□□ 0.33
CHD3-204ENST00000439235 LOC105371242A0A075B767 164 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 IGKV1D-8A0A087WSZ0 117 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 CENPXA8MT69 81 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 C12orf77C9JDV5 145 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 RAB3DO95716 219 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 CD74P04233 296 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 CTXN2P0C2S0 81 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 IFITM3Q01628 133 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 MEF2DQ14814 521 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 CDK10Q15131 360 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 TMEM200BQ69YZ2 307 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 TCF23Q7RTU1 214 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 KRTAP1-3Q8IUG1 177 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 Q96MF0 132 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 ZNF714Q96N38 554 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 NECAP2Q9NVZ3 263 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 CALYQ9NYX4 217 aa17.1■□□□□ 0.33
CHD3-204ENST00000439235 LINC00854A0A1B0GVQ3 168 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 KIAA1324LA8MWY0 1029 aaPredicted RBP17.09■□□□□ 0.33
CHD3-204ENST00000439235 DIRAS3O95661 229 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 HBZP02008 142 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 SCTP09683 121 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 GSTT2P0CG29 244 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 IL2RGP31785 369 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 SSTR5P35346 364 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 HRH1P35367 487 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 ZNF273Q14593 569 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 TMEM30BQ3MIR4 351 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 VAX1Q5SQQ9 334 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 PRR18Q8N4B5 295 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 ZFAND2BQ8WV99 257 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 ARL11Q969Q4 196 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 GALMQ96C23 342 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 CABLES2Q9BTV7 478 aa17.09■□□□□ 0.33
CHD3-204ENST00000439235 PPIAL4CA0A0B4J2A2 164 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 KBTBD11-OT1A0A1B0GTJ5 212 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 MEX3AA1L020 520 aaKnown RBP17.08■□□□□ 0.32
CHD3-204ENST00000439235 NAP1L6A6NFF2 107 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 C22orf46C9J442 243 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 M0QYG6 137 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 ENSAO43768 121 aaKnown RBP17.08■□□□□ 0.32
CHD3-204ENST00000439235 PMP2P02689 132 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 IFNA6P05013 189 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 LIPFP07098 398 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 PPIAL4GP0DN37 164 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 CGB3P0DN86 165 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 CGB7P0DN87 165 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 LOXL1Q08397 574 aaPredicted RBP17.08■□□□□ 0.32
CHD3-204ENST00000439235 ASAH1Q13510 395 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 LY6G5BQ8NDX9 201 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 OR4C16Q8NGL9 310 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 DMRTB1Q96MA1 342 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 HRASLSQ9HDD0 168 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 EHFQ9NZC4 300 aa17.08■□□□□ 0.32
CHD3-204ENST00000439235 CRYBG3Q68DQ2 2970 aa17.07■□□□□ 0.32
CHD3-204ENST00000439235 A0A096LNT2 108 aa17.07■□□□□ 0.32
CHD3-204ENST00000439235 C15orf65H3BRN8 121 aa17.07■□□□□ 0.32
CHD3-204ENST00000439235 ZNF728P0DKX0 622 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms