RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 TCF23Q7RTU1 214 aa8.7□□□□□ -1.02
HLA-DMB-259ENST00000438510 RTN4RL2Q86UN3 420 aa8.7□□□□□ -1.02
HLA-DMB-259ENST00000438510 IZUMO1Q8IYV9 350 aa8.7□□□□□ -1.02
HLA-DMB-259ENST00000438510 TEX29Q8N6K0 151 aa8.7□□□□□ -1.02
HLA-DMB-259ENST00000438510 OR13A1Q8NGR1 328 aa8.7□□□□□ -1.02
HLA-DMB-259ENST00000438510 OR4K15Q8NH41 348 aa8.7□□□□□ -1.02
HLA-DMB-259ENST00000438510 SETD6Q8TBK2 473 aa8.7□□□□□ -1.02
HLA-DMB-259ENST00000438510 MRGPRDQ8TDS7 321 aa8.7□□□□□ -1.02
HLA-DMB-259ENST00000438510 AUNIPQ9H7T9 357 aa8.7□□□□□ -1.02
HLA-DMB-259ENST00000438510 MBNL3Q9NUK0 354 aaKnown RBP8.7□□□□□ -1.02
HLA-DMB-259ENST00000438510 KCNIP1Q9NZI2 227 aa8.7□□□□□ -1.02
HLA-DMB-259ENST00000438510 ORC5O43913 435 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 CCL3L1P16619 93 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 TNFSF8P32971 234 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 CBX5P45973 191 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 ERVFRD-1P60508 538 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 ARF6P62330 175 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 PAX8Q06710 450 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 KRTAP1-1Q07627 177 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 TMEM30BQ3MIR4 351 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 FAHD2BQ6P2I3 314 aaPredicted RBP8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 ZNF880Q6PDB4 577 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 C1orf122Q6ZSJ8 110 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 CCDC107Q8WV48 283 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 S100ZQ8WXG8 99 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 FAHD2AQ96GK7 314 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 HDHD3Q9BSH5 251 aaPredicted RBP8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 C7orf69Q9H7B7 122 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 METTL8Q9H825 291 aaKnown RBP8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 SCPEP1Q9HB40 452 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 CALYQ9NYX4 217 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 MRPS7Q9Y2R9 242 aaKnown RBP8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 AUP1Q9Y679 476 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 WNK2Q9Y3S1 2297 aa8.69□□□□□ -1.02
HLA-DMB-259ENST00000438510 ABCA1O95477 2261 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 KBTBD11-OT1A0A1B0GTJ5 212 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 MEX3AA1L020 520 aaKnown RBP8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 FABP12A6NFH5 140 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 C17orf98A8MV24 154 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 A8MV72 311 aaPredicted RBP8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 SULT1C2O00338 296 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 SPINT2O43291 252 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 TOX4O94842 621 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 FCGR3AP08637 254 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 RCC1P18754 421 aaPredicted RBP8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 PRSS3P35030 304 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 SSTR5P35346 364 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 KIR2DS4P43632 304 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 HLA-DRB3P79483 266 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 MRPS10P82664 201 aaKnown RBP8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 IL18Q14116 193 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 KIR2DS1Q14954 304 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 SRSF7Q16629 238 aaKnown RBP eCLIP8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 SPANXN2Q5MJ10 180 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 NCR3LG1Q68D85 454 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 OR52W1Q6IF63 320 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 PYHIN1Q6K0P9 492 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 CLEC9AQ6UXN8 241 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 HEPN1Q6WQI6 88 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 SNX29P2Q8IUI4 249 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 DTX3Q8N9I9 347 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 OR10A7Q8NGE5 316 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 OR6Q1Q8NGQ2 317 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 NUDCD2Q8WVJ2 157 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 BORCS5Q969J3 196 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 ARL11Q969Q4 196 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 PPP1R14BQ96C90 147 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 CYYR1Q96J86 154 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 TMPRSS13Q9BYE2 586 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 SIRPDQ9H106 197 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 TAF9BQ9HBM6 251 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 ZNF286AQ9HBT8 521 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 Q9N2K0 584 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 PLA2G2EQ9NZK7 142 aa8.68□□□□□ -1.02
HLA-DMB-259ENST00000438510 ZANQ9Y493 2812 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 C12orf77C9JDV5 145 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 LY6G6DO95868 133 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 HLA-DQB1P01920 261 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 LPLP06858 475 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 IGHV1-8P0DP01 117 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 MMP9P14780 707 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 HNF1AP20823 631 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 PTBP1P26599 531 aaKnown RBP eCLIP8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 DLX6P56179 175 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 HMGN3Q15651 99 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 C17orf58Q2M2W7 97 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 FAM131AQ6UXB0 335 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 Q6ZS49 121 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 MED13LQ71F56 2210 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 VMO1Q7Z5L0 202 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 CCDC190Q86UF4 302 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 PCGF1Q9BSM1 259 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 WDR12Q9GZL7 423 aaKnown RBP8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 LINC00574Q9H8X3 128 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 UNKLQ9H9P5 680 aaKnown RBP8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 IFT46Q9NQC8 304 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 YAE1D1Q9NRH1 226 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 IDI2-AS1Q9NZ38 188 aa8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 ELF5Q9UKW6 265 aaPredicted RBP8.67□□□□□ -1.02
HLA-DMB-259ENST00000438510 SESN1Q9Y6P5 492 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms