RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 OR2W1Q9Y3N9 320 aa21.7■■□□□ 1.06
CPNE1-216ENST00000437340 TMED3Q9Y3Q3 217 aa21.7■■□□□ 1.06
CPNE1-216ENST00000437340 PRR14LQ5THK1 2151 aa21.7■■□□□ 1.06
CPNE1-216ENST00000437340 IGKV1D-13A0A0B4J2D9 117 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 A6NLC8 198 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 F5H0A9 414 aaPredicted RBP21.69■■□□□ 1.06
CPNE1-216ENST00000437340 IGKV1-13P0DP09 117 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 NKX6-1P78426 367 aaPredicted RBP21.69■■□□□ 1.06
CPNE1-216ENST00000437340 ACP7Q6ZNF0 438 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 ZNF818PQ6ZRF7 136 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 ZNF826PQ6ZT77 177 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 CMTM1Q8IZ96 169 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 STOML3Q8TAV4 291 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 TP53RKQ96S44 253 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 SLC25A32Q9H2D1 315 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 ZFP57Q9NU63 452 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 TRAPPC2LQ9UL33 140 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 MAP1BP46821 2468 aaKnown RBP21.69■■□□□ 1.06
CPNE1-216ENST00000437340 IGHV3-13P01766 116 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 CD200P41217 278 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 S100A10P60903 97 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 PRAMEF6Q5VXH4 476 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 LYZL2Q7Z4W2 148 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 TBC1D26Q86UD7 250 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 OR1S1Q8NH92 325 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 ZNF835Q9Y2P0 537 aa21.69■■□□□ 1.06
CPNE1-216ENST00000437340 PTBP3O95758 552 aaKnown RBP21.68■■□□□ 1.06
CPNE1-216ENST00000437340 BMP5P22003 454 aa21.68■■□□□ 1.06
CPNE1-216ENST00000437340 SMCO1Q147U7 214 aa21.68■■□□□ 1.06
CPNE1-216ENST00000437340 GFRALQ6UXV0 394 aa21.68■■□□□ 1.06
CPNE1-216ENST00000437340 MARVELD3Q96A59 401 aa21.68■■□□□ 1.06
CPNE1-216ENST00000437340 TMEM56Q96MV1 263 aa21.68■■□□□ 1.06
CPNE1-216ENST00000437340 OR14J1Q9UGF5 321 aa21.68■■□□□ 1.06
CPNE1-216ENST00000437340 TMEM56-RWDD3S4R434 201 aa21.68■■□□□ 1.06
CPNE1-216ENST00000437340 IFNL4K9M1U5 179 aa21.67■■□□□ 1.06
CPNE1-216ENST00000437340 DEDDO75618 318 aa21.67■■□□□ 1.06
CPNE1-216ENST00000437340 SMIM21Q3B7S5 101 aa21.67■■□□□ 1.06
CPNE1-216ENST00000437340 ASF1BQ9NVP2 202 aa21.67■■□□□ 1.06
CPNE1-216ENST00000437340 ELOVL5Q9NYP7 299 aa21.67■■□□□ 1.06
CPNE1-216ENST00000437340 ZGRF1Q86YA3 2104 aa21.67■■□□□ 1.06
CPNE1-216ENST00000437340 S100GP29377 79 aa21.66■■□□□ 1.06
CPNE1-216ENST00000437340 RPS23P62266 143 aaKnown RBP21.66■■□□□ 1.06
CPNE1-216ENST00000437340 FAM27E3Q08E93 113 aa21.66■■□□□ 1.06
CPNE1-216ENST00000437340 HMGN3Q15651 99 aa21.66■■□□□ 1.06
CPNE1-216ENST00000437340 MSMPQ1L6U9 139 aa21.66■■□□□ 1.06
CPNE1-216ENST00000437340 PDZD9Q8IXQ8 264 aa21.66■■□□□ 1.06
CPNE1-216ENST00000437340 SHARPINQ9H0F6 387 aa21.66■■□□□ 1.06
CPNE1-216ENST00000437340 CCL28Q9NRJ3 127 aa21.66■■□□□ 1.06
CPNE1-216ENST00000437340 A0A0G2JNJ9 132 aa21.66■■□□□ 1.06
CPNE1-216ENST00000437340 TMEM30CPA0ZSE6 113 aa21.66■■□□□ 1.06
CPNE1-216ENST00000437340 KCNAB3O43448 404 aa21.66■■□□□ 1.06
CPNE1-216ENST00000437340 LHFPL5Q8TAF8 219 aa21.66■■□□□ 1.06
CPNE1-216ENST00000437340 Q9UFV3 132 aa21.66■■□□□ 1.06
CPNE1-216ENST00000437340 DUSP13Q9UII6 198 aa21.66■■□□□ 1.06
CPNE1-216ENST00000437340 UBE2J1Q9Y385 318 aaPredicted RBP21.66■■□□□ 1.06
CPNE1-216ENST00000437340 ITPR1Q14643 2758 aa21.65■■□□□ 1.06
CPNE1-216ENST00000437340 IGLV3-9A0A075B6K5 115 aa21.65■■□□□ 1.06
CPNE1-216ENST00000437340 DUXBA0A1W2PPF3 345 aa21.65■■□□□ 1.06
CPNE1-216ENST00000437340 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.65■■□□□ 1.06
CPNE1-216ENST00000437340 WNT9BO14905 357 aa21.65■■□□□ 1.06
CPNE1-216ENST00000437340 KLF3P57682 345 aaPredicted RBP21.65■■□□□ 1.06
CPNE1-216ENST00000437340 SLC35E4Q6ICL7 350 aa21.65■■□□□ 1.06
CPNE1-216ENST00000437340 ALKBH2Q6NS38 261 aa21.65■■□□□ 1.06
CPNE1-216ENST00000437340 BVESQ8NE79 360 aa21.65■■□□□ 1.06
CPNE1-216ENST00000437340 OR2Z1Q8NG97 314 aa21.65■■□□□ 1.06
CPNE1-216ENST00000437340 OR10Z1Q8NGY1 313 aa21.65■■□□□ 1.06
CPNE1-216ENST00000437340 UFSP2Q9NUQ7 469 aa21.65■■□□□ 1.06
CPNE1-216ENST00000437340 MSGN1A6NI15 193 aa21.64■■□□□ 1.06
CPNE1-216ENST00000437340 HSD17B6O14756 317 aa21.64■■□□□ 1.06
CPNE1-216ENST00000437340 PSPNO60542 156 aa21.64■■□□□ 1.06
CPNE1-216ENST00000437340 WNT2P09544 360 aa21.64■■□□□ 1.06
CPNE1-216ENST00000437340 TPT1P13693 172 aaKnown RBP21.64■■□□□ 1.06
CPNE1-216ENST00000437340 CFHR2P36980 270 aa21.64■■□□□ 1.06
CPNE1-216ENST00000437340 KLRB1Q12918 225 aa21.64■■□□□ 1.06
CPNE1-216ENST00000437340 TMEM268Q5VZI3 342 aa21.64■■□□□ 1.06
CPNE1-216ENST00000437340 LRP11Q86VZ4 500 aa21.64■■□□□ 1.06
CPNE1-216ENST00000437340 SLC35G3Q8N808 338 aa21.64■■□□□ 1.06
CPNE1-216ENST00000437340 LILRB1Q8NHL6 650 aaPredicted RBP21.64■■□□□ 1.06
CPNE1-216ENST00000437340 HEATR1Q9H583 2144 aaKnown RBP21.64■■□□□ 1.05
CPNE1-216ENST00000437340 PIGBOS1A0A0B4J2F0 54 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 A0A1B0GW55 424 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 hCG_1807616A0A1W2PRN6 198 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 CDS2O95674 445 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 DUX4L2P0CJ85 424 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 DUX4L3P0CJ86 424 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 DUX4L4P0CJ87 422 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 DUX4L5P0CJ88 424 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 DUX4L6P0CJ89 424 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 DUX4L7P0CJ90 424 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 UCP1P25874 307 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 MEX3BQ6ZN04 569 aaKnown RBP21.64■■□□□ 1.05
CPNE1-216ENST00000437340 OR10V1Q8NGI7 309 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 TMEM171Q8WVE6 324 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 IL1F10Q8WWZ1 152 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 CYTL1Q9NRR1 136 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 DUX4Q9UBX2 424 aa21.64■■□□□ 1.05
CPNE1-216ENST00000437340 ERRFI1Q9UJM3 462 aaPredicted RBP21.64■■□□□ 1.05
CPNE1-216ENST00000437340 H0Y980 276 aa21.63■■□□□ 1.05
CPNE1-216ENST00000437340 TAAR5O14804 337 aa21.63■■□□□ 1.05
CPNE1-216ENST00000437340 CEBPDP49716 269 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms