RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 FAM90A15PP0C7V4 464 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM90A13PP0C7W8 464 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM90A14PP0C7W9 464 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM90A24PP0C7X0 464 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 SSX1Q16384 188 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 CCDC190Q86UF4 302 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM219AQ8IW50 185 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM168AQ92567 244 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 SPINK9Q5DT21 86 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 NSUN5P2Q63ZY6 315 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 TCEAL7Q9BRU2 100 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 SLC25A22Q9H936 323 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 M6PRP20645 277 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 MGAT2Q10469 447 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 CALHM1Q8IU99 346 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 P2RX4Q99571 388 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 CYB5R3P00387 301 aaPredicted RBP13.53□□□□□ -0.24
NEDD4-202ENST00000435532 ZNF708P17019 499 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 TVP23CQ96ET8 276 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 SMIM7Q9BQ49 75 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 WASHC3Q9Y3C0 194 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 C19orf67A6NJJ6 358 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 CTDSPLO15194 276 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 HTR1DP28221 377 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 GLRXP35754 106 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 C11orf87Q6NUJ2 197 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 ADAT3Q96EY9 351 aaPredicted RBP13.53□□□□□ -0.24
NEDD4-202ENST00000435532 ZNF629Q9UEG4 869 aaPredicted RBP13.53□□□□□ -0.24
NEDD4-202ENST00000435532 GAB2Q9UQC2 676 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 CD37P11049 281 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 GAPTQ8N292 157 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 JMJD8Q96S16 334 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 CLEC5AQ9NY25 188 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 OTOFQ9HC10 1997 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 IGLV3-12A0A075B6K2 115 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 TMEM229AB2RXF0 380 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 EXOSC2Q13868 293 aaKnown RBP13.53□□□□□ -0.24
NEDD4-202ENST00000435532 INSL4Q14641 139 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 ACSF3Q4G176 576 aaPredicted RBP13.53□□□□□ -0.24
NEDD4-202ENST00000435532 NEUROG3Q9Y4Z2 214 aa13.53□□□□□ -0.24
NEDD4-202ENST00000435532 NPIPB13A6NJU9 1138 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 NPIPB4C9JG80 1138 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 CD40P25942 277 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 SAXO1Q8IYX7 474 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 ZNRF4Q8WWF5 429 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 DHRS7CA6NNS2 312 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 E9PLN8 166 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 UMODP07911 640 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 PPP1R1AQ13522 171 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 LY6DQ14210 128 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 NCR3LG1Q68D85 454 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 RBPMS2Q6ZRY4 209 aaKnown RBP13.52□□□□□ -0.24
NEDD4-202ENST00000435532 OR4D10Q8NGI6 311 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 BLNKQ8WV28 456 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 PTX4Q96A99 478 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 VKORC1Q9BQB6 163 aa13.52□□□□□ -0.24
NEDD4-202ENST00000435532 ZNF552Q9H707 407 aaPredicted RBP13.52□□□□□ -0.24
NEDD4-202ENST00000435532 RALYQ9UKM9 306 aaKnown RBP13.52□□□□□ -0.24
NEDD4-202ENST00000435532 LOC102723996A0A087X1L8 192 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 DRAXINQ8NBI3 349 aaPredicted RBP13.52□□□□□ -0.25
NEDD4-202ENST00000435532 Q9N2K0 584 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 RABAC1Q9UI14 185 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 PPP5D1E7EU14 171 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 HPRT1P00492 218 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 PF4V1P10720 104 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 LIMS1P48059 325 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 C10orf128Q5T292 105 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 DTD1Q8TEA8 209 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 POM121Q96HA1 1249 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 ZNF488Q96MN9 340 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 NAGKQ9UJ70 344 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 ANKRD20A5PA0PJZ0 165 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 SNCGO76070 127 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 FUT5Q11128 374 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 IL24Q13007 206 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 NUP37Q8NFH4 326 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 DCTN5Q9BTE1 182 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 CCL28Q9NRJ3 127 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 ZMIZ1Q9ULJ6 1067 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 OR51B2Q9Y5P1 312 aa13.52□□□□□ -0.25
NEDD4-202ENST00000435532 A0A1W2PS18 150 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 EFEMP2O95967 443 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 CTF1Q16619 201 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 PDPNQ86YL7 162 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 TECRQ9NZ01 308 aaKnown RBP13.51□□□□□ -0.25
NEDD4-202ENST00000435532 DOK5Q9P104 306 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 TOX4O94842 621 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 OR2H2O95918 312 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 HIST1H1EP10412 219 aaKnown RBP13.51□□□□□ -0.25
NEDD4-202ENST00000435532 REG1BP48304 166 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 FAM27E3Q08E93 113 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 V9GYS6 101 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 DSPPQ9NZW4 1301 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 SYNGR2O43760 224 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 RFPL3SP0C7P2 107 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 VWA1Q6PCB0 445 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 TMEM167BQ9NRX6 74 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 MRPS18AQ9NVS2 196 aaKnown RBP13.51□□□□□ -0.25
NEDD4-202ENST00000435532 F5H697 171 aa13.51□□□□□ -0.25
NEDD4-202ENST00000435532 FSTP19883 344 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms