RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 CORO2AQ92828 525 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 HDHD3Q9BSH5 251 aaPredicted RBP9.07□□□□□ -0.96
CHD4-202ENST00000430771 SCPEP1Q9HB40 452 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 ZNF286AQ9HBT8 521 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 MMP26Q9NRE1 261 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 MBNL3Q9NUK0 354 aaKnown RBP9.07□□□□□ -0.96
CHD4-202ENST00000430771 CALYQ9NYX4 217 aa9.07□□□□□ -0.96
CHD4-202ENST00000430771 MRPS7Q9Y2R9 242 aaKnown RBP9.07□□□□□ -0.96
CHD4-202ENST00000430771 SULT1C2O00338 296 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 SPINT2O43291 252 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 LPLP06858 475 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 CCL3L1P16619 93 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 GZMHP20718 246 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 TNFSF8P32971 234 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 PRSS3P35030 304 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 ERVFRD-1P60508 538 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 HMGN3Q15651 99 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 TMEM200BQ69YZ2 307 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 ZNF880Q6PDB4 577 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 FAM131AQ6UXB0 335 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 DTX3Q8N9I9 347 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 CCDC107Q8WV48 283 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 METTL8Q9H825 291 aaKnown RBP9.06□□□□□ -0.96
CHD4-202ENST00000430771 IFT46Q9NQC8 304 aa9.06□□□□□ -0.96
CHD4-202ENST00000430771 KBTBD11-OT1A0A1B0GTJ5 212 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 FABP12A6NFH5 140 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 C17orf98A8MV24 154 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 TOX4O94842 621 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 PTBP1P26599 531 aaKnown RBP eCLIP9.05□□□□□ -0.96
CHD4-202ENST00000430771 SSTR5P35346 364 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 ACTBP60709 375 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 ARF6P62330 175 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 ACTG1P63261 375 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 PAX8Q06710 450 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 KRTAP1-1Q07627 177 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 MADCAM1Q13477 382 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 SRSF7Q16629 238 aaKnown RBP eCLIP9.05□□□□□ -0.96
CHD4-202ENST00000430771 CR1LQ2VPA4 569 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 NCR3LG1Q68D85 454 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 OR52W1Q6IF63 320 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 C1orf122Q6ZSJ8 110 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 CCDC190Q86UF4 302 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 OR10A7Q8NGE5 316 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 ARL11Q969Q4 196 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 SIRPDQ9H106 197 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 C7orf69Q9H7B7 122 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 Q9N2K0 584 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 AUP1Q9Y679 476 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 SESN1Q9Y6P5 492 aa9.05□□□□□ -0.96
CHD4-202ENST00000430771 FLNAP21333 2647 aaKnown RBP9.05□□□□□ -0.96
CHD4-202ENST00000430771 ZNF469Q96JG9 3925 aaPredicted RBP9.04□□□□□ -0.96
CHD4-202ENST00000430771 TRAV39A0A0B4J263 110 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 MEX3AA1L020 520 aaKnown RBP9.04□□□□□ -0.96
CHD4-202ENST00000430771 A8MV72 311 aaPredicted RBP9.04□□□□□ -0.96
CHD4-202ENST00000430771 C12orf77C9JDV5 145 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 GABARAPH6UMI1 98 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 CTDSPLO15194 276 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 DIRAS3O95661 229 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 HLA-DQB1P01920 261 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 IGHV1-8P0DP01 117 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 RCC1P18754 421 aaPredicted RBP9.04□□□□□ -0.96
CHD4-202ENST00000430771 HNF1AP20823 631 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 FPR2P25090 351 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 RCVRNP35243 200 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 ETV6P41212 452 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 DLX6P56179 175 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 GUCA2AQ02747 115 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 C17orf58Q2M2W7 97 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 PRAMEF5Q5TYX0 476 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 FAHD2BQ6P2I3 314 aaPredicted RBP9.04□□□□□ -0.96
CHD4-202ENST00000430771 HEPN1Q6WQI6 88 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 Q6ZS49 121 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 VMO1Q7Z5L0 202 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 PRR18Q8N4B5 295 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 OR4A4PQ8NGN8 299 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 GPX8Q8TED1 209 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 SMIM4Q8WVI0 70 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 GCDHQ92947 438 aaPredicted RBP9.04□□□□□ -0.96
CHD4-202ENST00000430771 GALMQ96C23 342 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 FAHD2AQ96GK7 314 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 CYYR1Q96J86 154 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 PCGF1Q9BSM1 259 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 TMPRSS13Q9BYE2 586 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 LINC00574Q9H8X3 128 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 UNKLQ9H9P5 680 aaKnown RBP9.04□□□□□ -0.96
CHD4-202ENST00000430771 TAF9BQ9HBM6 251 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 SIRT7Q9NRC8 400 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 YAE1D1Q9NRH1 226 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 IDI2-AS1Q9NZ38 188 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 JPT1Q9UK76 154 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 ELF5Q9UKW6 265 aaPredicted RBP9.04□□□□□ -0.96
CHD4-202ENST00000430771 V9GYH0 126 aa9.04□□□□□ -0.96
CHD4-202ENST00000430771 ARHGAP32A7KAX9 2087 aa9.03□□□□□ -0.96
CHD4-202ENST00000430771 TRAV40A0A0B4J280 105 aa9.03□□□□□ -0.96
CHD4-202ENST00000430771 TRDCB7Z8K6 153 aa9.03□□□□□ -0.96
CHD4-202ENST00000430771 NPIPB11E5RHQ5 1161 aa9.03□□□□□ -0.96
CHD4-202ENST00000430771 C15orf65H3BRN8 121 aa9.03□□□□□ -0.96
CHD4-202ENST00000430771 F2RL2O00254 374 aa9.03□□□□□ -0.96
CHD4-202ENST00000430771 SDCBPO00560 298 aaPredicted RBP9.03□□□□□ -0.96
CHD4-202ENST00000430771 FABP7O15540 132 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms