RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 Q6ZT83 130 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 RNF2Q99496 336 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 THYN1Q9P016 225 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 MED12LQ86YW9 2145 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 PDGFBP01127 241 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-208ENST00000430669 CXCL3P19876 107 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 H3F3AP84243 136 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 MRGPRDQ8TDS7 321 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 SLC35B3Q9H1N7 401 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 EXPH5Q8NEV8 1989 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 GOLGB1Q14789 3259 aaKnown RBP10.02□□□□□ -0.81
PTCH1-208ENST00000430669 PPIHO43447 177 aaKnown RBP10.02□□□□□ -0.81
PTCH1-208ENST00000430669 DMRTC1Q5HYR2 192 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 DBX2Q6ZNG2 339 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 EP300Q09472 2414 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-208ENST00000430669 LOC101059948A0A1B0GTJ6 334 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 RNASEK-C17orf49H0YIS7 233 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 EFNB2P52799 333 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 LRRC75AQ8NAA5 344 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 CCL17Q92583 94 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 RPEQ96AT9 228 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 C14orf79Q96F83 325 aa10.02□□□□□ -0.81
PTCH1-208ENST00000430669 ZNF727A8MUV8 499 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 PITX3O75364 302 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 FAM122CQ6P4D5 195 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 ZNF251Q9BRH9 671 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 SLC7A10Q9NS82 523 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 TIMM8BQ9Y5J9 83 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-208ENST00000430669 ZIC3O60481 467 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 MGST1P10620 155 aaKnown RBP10.01□□□□□ -0.81
PTCH1-208ENST00000430669 NAAAQ02083 359 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 ZNF260Q3ZCT1 412 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 FAM162BQ5T6X4 162 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 ZNF66Q6ZN08 573 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 FAM90A27PA6NNH2 459 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 OR7C2O60412 319 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 ZNF645Q8N7E2 425 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 TMEM104Q8NE00 496 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 OR3A1P47881 315 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 TMEM267Q0VDI3 215 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-208ENST00000430669 SNAI3Q3KNW1 292 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 LGALSLQ3ZCW2 172 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-208ENST00000430669 MOB3BQ86TA1 216 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 CT45A10P0DMU9 189 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 OR8G5Q8NG78 346 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 SH2D2AQ9NP31 389 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 FCGR3BO75015 233 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 NQO2P16083 231 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 PTGDSP41222 190 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 ADAD2Q8NCV1 583 aaKnown RBP10.01□□□□□ -0.81
PTCH1-208ENST00000430669 ZNF71Q9NQZ8 489 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-208ENST00000430669 IL36GQ9NZH8 169 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 FOXJ2Q9P0K8 574 aa10.01□□□□□ -0.81
PTCH1-208ENST00000430669 POLEQ07864 2286 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 H3BMH7 237 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 NDUFA2O43678 99 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 SFTA3P0C7M3 94 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 GAPTQ8N292 157 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 OR1L4Q8NGR5 311 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 NPDC1Q9NQX5 325 aaPredicted RBP10□□□□□ -0.81
PTCH1-208ENST00000430669 MTCH1Q9NZJ7 389 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 PRNDQ9UKY0 176 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 ZNF561Q8N587 486 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 OR51I2Q9H344 312 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 ADAM10O14672 748 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 RAB29O14966 203 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 FBP1P09467 338 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 RHOBP62745 196 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 GNB2P62879 340 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 C3orf80F5H4A9 247 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 FAM74A3Q4VXF1 159 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 SMIM7Q9BQ49 75 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 Q96M66 194 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 CST7O76096 145 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 DYNLT3P51808 116 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 PJVKQ0ZLH3 352 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 STPG2Q8N412 459 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 FBXL17Q9UF56 701 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 RIF1Q5UIP0 2472 aaKnown RBP10□□□□□ -0.81
PTCH1-208ENST00000430669 SEMA7AO75326 666 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 TMEM33P57088 247 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 OR13D1Q8NGV5 346 aa10□□□□□ -0.81
PTCH1-208ENST00000430669 MED13Q9UHV7 2174 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 CRYM-AS1A6NIL9 109 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 H7BYZ3 331 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 UMODP07911 640 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 RPS2P15880 293 aaKnown RBP9.99□□□□□ -0.81
PTCH1-208ENST00000430669 FAM3AP98173 230 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 TM2D1Q9BX74 207 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 FREM1Q5H8C1 2179 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 TLE1Q04724 770 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 NCR3LG1Q68D85 454 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 MOGAT3Q86VF5 341 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 LPAR5Q9H1C0 372 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 FOXD3Q9UJU5 478 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-208ENST00000430669 NUPL2O15504 423 aaKnown RBP9.99□□□□□ -0.81
PTCH1-208ENST00000430669 HSD17B13Q7Z5P4 300 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-208ENST00000430669 R3HDM4Q96D70 268 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 HES4Q9HCC6 221 aa9.99□□□□□ -0.81
PTCH1-208ENST00000430669 SLC45A2Q9UMX9 530 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms