RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 ZNF184Q99676 751 aaPredicted RBP9.55□□□□□ -0.88
TTC3-208ENST00000428693 MRPS18AQ9NVS2 196 aaKnown RBP9.55□□□□□ -0.88
TTC3-208ENST00000428693 CLEC2DQ9UHP7 191 aa9.55□□□□□ -0.88
TTC3-208ENST00000428693 EXOSC1Q9Y3B2 195 aaKnown RBP9.55□□□□□ -0.88
TTC3-208ENST00000428693 SIRT4Q9Y6E7 314 aaPredicted RBP9.55□□□□□ -0.88
TTC3-208ENST00000428693 A0A1W2PP11 408 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 A0A1W2PPI3 338 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 AIPO00170 330 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 GAPDHP04406 335 aaKnown RBP9.54□□□□□ -0.88
TTC3-208ENST00000428693 GTF2F2P13984 249 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 GZMHP20718 246 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 HOXD3P31249 432 aaPredicted RBP9.54□□□□□ -0.88
TTC3-208ENST00000428693 SLC35B1P78383 322 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 ZNF529Q6P280 563 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 SLC35E3Q7Z769 313 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 THNSL2Q86YJ6 484 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 OR8H3Q8N146 312 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 OR51D1Q8NGF3 324 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 DPF1Q92782 380 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 GHSRQ92847 366 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 MUL1Q969V5 352 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 SMIM19Q96E16 107 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 TMEM80Q96HE8 168 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 NCOR1P1Q9H4R4 102 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 TRAPPC2LQ9UL33 140 aa9.54□□□□□ -0.88
TTC3-208ENST00000428693 MRPS28Q9Y2Q9 187 aaKnown RBP9.54□□□□□ -0.88
TTC3-208ENST00000428693 MCRIP1C9JLW8 97 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 NPIPB11E5RHQ5 1161 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 ZNF780AO75290 641 aaPredicted RBP9.53□□□□□ -0.88
TTC3-208ENST00000428693 MAS1P04201 325 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 IL3RAP26951 378 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 FAM53AQ6NSI3 398 aaPredicted RBP9.53□□□□□ -0.88
TTC3-208ENST00000428693 GLIPR1L1Q6UWM5 242 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 ASCL4Q6XD76 172 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 C8orf86Q6ZUL3 223 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 FOXRED2Q8IWF2 684 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 C5orf56Q8N8D9 126 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 KLHL30-AS1Q8NEE0 82 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 WFDC9Q8NEX5 89 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 OR10A7Q8NGE5 316 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 OR10V1Q8NGI7 309 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 OR4K15Q8NH41 348 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 CHPT1Q8WUD6 406 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 RCC1LQ96I51 464 aaKnown RBP9.53□□□□□ -0.88
TTC3-208ENST00000428693 ETAA1Q9NY74 926 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 IL36GQ9NZH8 169 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 GNG12Q9UBI6 72 aa9.53□□□□□ -0.88
TTC3-208ENST00000428693 DIMT1Q9UNQ2 313 aaKnown RBP9.53□□□□□ -0.88
TTC3-208ENST00000428693 IGHV1-3A0A0C4DH29 117 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 MAGEA13PA6NCF6 341 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 FAM90A18PA6NE21 464 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 FAM90A16PA6NEW6 464 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 FAM90A20PA6NIJ5 464 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 FAM90A9PA6NNJ1 464 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 FAM90A12PA8MX19 464 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 FAM90A5PA8MXJ8 464 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 OGG1O15527 345 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 LALBAP00709 142 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 FAM90A15PP0C7V4 464 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 FAM90A13PP0C7W8 464 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 FAM90A14PP0C7W9 464 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 FAM90A24PP0C7X0 464 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 RPL23AP62750 156 aaKnown RBP9.52□□□□□ -0.89
TTC3-208ENST00000428693 GPR176Q14439 515 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 MPV17LQ2QL34 196 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 Q499Y3 187 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 TTC23Q5W5X9 447 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 AWAT2Q6E213 333 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 SLC16A12Q6ZSM3 486 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 C18orf65Q6ZTR6 163 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 LINC00596Q86U02 117 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 SETD9Q8NE22 299 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 Q8NFD4 153 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 OR2T10Q8NGZ9 312 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 RDH12Q96NR8 316 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 OR14A2Q96R54 314 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 BANF2Q9H503 90 aa9.52□□□□□ -0.89
TTC3-208ENST00000428693 DNAH3Q8TD57 4116 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 TRAV8-7A0A075B6U6 113 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 SPINT2O43291 252 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 FGF16O43320 207 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 CRTAPO75718 401 aaPredicted RBP9.51□□□□□ -0.89
TTC3-208ENST00000428693 DUS4LO95620 317 aaKnown RBP9.51□□□□□ -0.89
TTC3-208ENST00000428693 MT-ND4P03905 459 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 ST3GAL4Q11206 333 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 YIF1BQ5BJH7 314 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 NHLRC3Q5JS37 347 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 SYT6Q5T7P8 510 aaPredicted RBP9.51□□□□□ -0.89
TTC3-208ENST00000428693 RAB12Q6IQ22 244 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 OR2W3Q7Z3T1 314 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 MRPL41Q8IXM3 137 aaKnown RBP9.51□□□□□ -0.89
TTC3-208ENST00000428693 DHRSXQ8N5I4 330 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 GGHQ92820 318 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 RBMXL1Q96E39 390 aaKnown RBP9.51□□□□□ -0.89
TTC3-208ENST00000428693 EAF1Q96JC9 268 aaPredicted RBP9.51□□□□□ -0.89
TTC3-208ENST00000428693 DUX3Q96PT4 197 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 RASL11BQ9BPW5 248 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 SELENOIQ9C0D9 397 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 LINC00574Q9H8X3 128 aa9.51□□□□□ -0.89
TTC3-208ENST00000428693 SPACA1Q9HBV2 294 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms