RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 CCDC54Q8NEL0 328 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 OR10A7Q8NGE5 316 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 OR13C9Q8NGT0 318 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 CNIH3Q8TBE1 160 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 RNF166Q96A37 237 aaPredicted RBP6.25□□□□□ -1.41
ITSN1-216ENST00000428240 SPSB1Q96BD6 273 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 RITA1Q96K30 269 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 NR1H4Q96RI1 486 aaPredicted RBP6.25□□□□□ -1.41
ITSN1-216ENST00000428240 MBOAT4Q96T53 435 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 NABP2Q9BQ15 211 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 CHCHD6Q9BRQ6 235 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 RSRP1Q9BUV0 290 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 TMED9Q9BVK6 235 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 BARHL1Q9BZE3 327 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 HIPK2Q9H2X6 1198 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 NCOR1P1Q9H4R4 102 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 ZNF556Q9HAH1 456 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 NEK6Q9HC98 313 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 PARP11Q9NR21 331 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 FBXO7Q9Y3I1 522 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 HECTD4Q9Y4D8 3996 aa6.25□□□□□ -1.41
ITSN1-216ENST00000428240 A0A1W2PN81 502 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 METTL15A6NJ78 407 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 C15orf65H3BRN8 121 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 SDCBPO00560 298 aaPredicted RBP6.24□□□□□ -1.41
ITSN1-216ENST00000428240 APOL3O95236 402 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 IGHV3-11P01762 117 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 OCM2P0CE71 109 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 OCMP0CE72 109 aaPredicted RBP6.24□□□□□ -1.41
ITSN1-216ENST00000428240 UBCP0CG48 685 aaKnown RBP6.24□□□□□ -1.41
ITSN1-216ENST00000428240 RAP2AP10114 183 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 BLVRBP30043 206 aaPredicted RBP6.24□□□□□ -1.41
ITSN1-216ENST00000428240 CHRNA7P36544 502 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 ZNF134P52741 427 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 CRISP1P54107 249 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 EFNB1P98172 346 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 NDPQ00604 133 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 GK3PQ14409 553 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 SPATS1Q496A3 300 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 ANKRD13BQ86YJ7 626 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 SAXO1Q8IYX7 474 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 RPP25LQ8N5L8 163 aaKnown RBP6.24□□□□□ -1.41
ITSN1-216ENST00000428240 OR51A4Q8NGJ6 313 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 OR10AC1Q8NH08 325 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 UTP4Q969X6 686 aaKnown RBP6.24□□□□□ -1.41
ITSN1-216ENST00000428240 ELAC2Q9BQ52 826 aaKnown RBP6.24□□□□□ -1.41
ITSN1-216ENST00000428240 THAP7Q9BT49 309 aaPredicted RBP6.24□□□□□ -1.41
ITSN1-216ENST00000428240 TEX12Q9BXU0 123 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 TUBA4BQ9H853 241 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 RHOFQ9HBH0 211 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 ARL8BQ9NVJ2 186 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 CHCHD3Q9NX63 227 aaKnown RBP6.24□□□□□ -1.41
ITSN1-216ENST00000428240 STUB1Q9UNE7 303 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 MRPS28Q9Y2Q9 187 aaKnown RBP6.24□□□□□ -1.41
ITSN1-216ENST00000428240 VPS13DQ5THJ4 4388 aa6.24□□□□□ -1.41
ITSN1-216ENST00000428240 GNGT2O14610 69 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 BRI3O95415 125 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 HLA-DRB1P01911 266 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 MT-ND2P03891 347 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 HSPB1P04792 205 aaKnown RBP6.23□□□□□ -1.41
ITSN1-216ENST00000428240 TMEM225BP0DP42 221 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 ZNF20P17024 532 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 FSTP19883 344 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 PAX5Q02548 391 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 PTGES3Q15185 160 aaKnown RBP6.23□□□□□ -1.41
ITSN1-216ENST00000428240 ECSCRQ19T08 205 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 PIGYQ3MUY2 71 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 C19orf54Q5BKX5 351 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 RNLSQ5VYX0 342 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 NXNL2Q5VZ03 156 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 LINC00322Q6ZN03 302 aaPredicted RBP6.23□□□□□ -1.41
ITSN1-216ENST00000428240 SLC25A48Q6ZT89 311 aaKnown RBP6.23□□□□□ -1.41
ITSN1-216ENST00000428240 SATL1Q86VE3 508 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 DHFR2Q86XF0 187 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 TCEANCQ8N8B7 351 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 C8orf31Q8N9H6 132 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 ARL11Q969Q4 196 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 ELOVL1Q9BW60 279 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 ANKRD60Q9BZ19 345 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 FAM118AQ9NWS6 357 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 GFOD1Q9NXC2 390 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 FRRS1LQ9P0K9 344 aa6.23□□□□□ -1.41
ITSN1-216ENST00000428240 H2AFY2Q9P0M6 372 aaPredicted RBP6.23□□□□□ -1.41
ITSN1-216ENST00000428240 TXNL1O43396 289 aa6.22□□□□□ -1.41
ITSN1-216ENST00000428240 SULT1C4O75897 302 aa6.22□□□□□ -1.41
ITSN1-216ENST00000428240 DBTP11182 482 aaKnown RBP6.22□□□□□ -1.41
ITSN1-216ENST00000428240 ANXA8P13928 327 aa6.22□□□□□ -1.41
ITSN1-216ENST00000428240 GZMHP20718 246 aa6.22□□□□□ -1.41
ITSN1-216ENST00000428240 IL3RAP26951 378 aa6.22□□□□□ -1.41
ITSN1-216ENST00000428240 EPHA2P29317 976 aa6.22□□□□□ -1.41
ITSN1-216ENST00000428240 ZNF137PP52743 207 aa6.22□□□□□ -1.41
ITSN1-216ENST00000428240 NANOS3P60323 173 aaKnown RBP6.22□□□□□ -1.41
ITSN1-216ENST00000428240 ACTBP60709 375 aa6.22□□□□□ -1.41
ITSN1-216ENST00000428240 LSAMPQ13449 338 aa6.22□□□□□ -1.41
ITSN1-216ENST00000428240 TRIM25Q14258 630 aaKnown RBP6.22□□□□□ -1.41
ITSN1-216ENST00000428240 KISS1Q15726 138 aa6.22□□□□□ -1.41
ITSN1-216ENST00000428240 ZSCAN26Q16670 478 aa6.22□□□□□ -1.41
ITSN1-216ENST00000428240 TP53I3Q53FA7 332 aa6.22□□□□□ -1.41
ITSN1-216ENST00000428240 CT45A1Q5HYN5 189 aa6.22□□□□□ -1.41
ITSN1-216ENST00000428240 TMEM244Q5VVB8 128 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms