RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 NDUFS8O00217 210 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 HSPB6O14558 160 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 PPIHO43447 177 aaKnown RBP6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 NDUFS7O75251 213 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 CRLF1O75462 422 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 ZNF205O95201 554 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 CD3DP04234 171 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 HLA-DMAP28067 261 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 OR3A1P47881 315 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 CEBPDP49716 269 aaPredicted RBP6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 NPY4RP50391 375 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 DSCR9P59020 149 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 ARPC4P59998 168 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 TSPAN5P62079 268 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 AESQ08117 197 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 ZMYND11Q15326 602 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 TRIM16LQ309B1 348 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 C11orf91Q3C1V1 193 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 LRRC10Q5BKY1 277 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 KRBOX4Q5JUW0 171 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 VAX1Q5SQQ9 334 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 FAM201AQ5SY85 155 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 C6orf183Q5T699 404 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 RSBN1Q5VWQ0 802 aaPredicted RBP6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 ZNF880Q6PDB4 577 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 ZNF782Q6ZMW2 699 aaPredicted RBP6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 ARRDC1Q8N5I2 433 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 SPICQ8N5J4 248 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 GVQW1Q8N7I0 195 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 ZNRF1Q8ND25 227 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 OR4S1Q8NGB4 309 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 OR5H2Q8NGV7 314 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 SPATA3Q8NHX4 192 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 ENKURQ8TC29 256 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 MRPL30Q8TCC3 161 aaKnown RBP6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 CHPT1Q8WUD6 406 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 CCL13Q99616 98 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 PRRT1Q99946 306 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 TMEM246Q9BRR3 403 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 C11orf54Q9H0W9 315 aaPredicted RBP6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 PPA2Q9H2U2 334 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 MBNL3Q9NUK0 354 aaKnown RBP6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 NECAP2Q9NVZ3 263 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 OR6C3Q9NZP0 311 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 LPAR3Q9UBY5 353 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 ZNF230Q9UIE0 474 aaPredicted RBP6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 PCDHB10Q9UN67 800 aa6.87□□□□□ -1.31
SMARCAL1-206ENST00000427645 CSPG4Q6UVK1 2322 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 MEIKINA0A087WXM9 373 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 RNF212BA8MTL3 300 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 LYNX1G3V0Z9 82 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 ADAM20O43506 726 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 DIRAS3O95661 229 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 IGHV2-70P01814 119 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 AMY2AP04746 511 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 FCER2P06734 321 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 LYNX1P0DP58 116 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 SLC6A1P30531 599 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 HRH1P35367 487 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 ECI1P42126 302 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 GPR6P46095 362 aaPredicted RBP6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 PDLIM4P50479 330 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 MEF2CQ06413 473 aaPredicted RBP6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 ATXN7L3Q14CW9 347 aaPredicted RBP6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 OXA1LQ15070 435 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 CDK10Q15131 360 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 CLEC12BQ2HXU8 276 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 CR1LQ2VPA4 569 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 OR52W1Q6IF63 320 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 PLET1Q6UQ28 207 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 DHRS11Q6UWP2 260 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 NLRC3Q7RTR2 1065 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 OVCH2Q7RTZ1 564 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 NRARPQ7Z6K4 114 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 RTN4RL2Q86UN3 420 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 TMEM185AQ8NFB2 350 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 OR4C16Q8NGL9 310 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 OR4A4PQ8NGN8 299 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 OR6F1Q8NGZ6 308 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 PLPPR1Q8TBJ4 325 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 DYRK2Q92630 601 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 CORO2AQ92828 525 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 SNAPC3Q92966 411 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 SCGB3A2Q96PL1 93 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 GAFA1Q96PS6 74 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 SLC25A21Q9BQT8 299 aaPredicted RBP6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 HDHD3Q9BSH5 251 aaPredicted RBP6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 MCUBQ9NWR8 336 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 DCAF16Q9NXF7 216 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 SLC2A8Q9NY64 477 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 SLC25A10Q9UBX3 287 aaPredicted RBP6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 COL6A5A8TX70 2615 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 TLN2Q9Y4G6 2542 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 HIVEP2P31629 2446 aa6.86□□□□□ -1.31
SMARCAL1-206ENST00000427645 ROS1P08922 2347 aa6.85□□□□□ -1.31
SMARCAL1-206ENST00000427645 A0A1W2PPH5 198 aa6.85□□□□□ -1.31
SMARCAL1-206ENST00000427645 hADV38S2A0JD32 116 aa6.85□□□□□ -1.31
SMARCAL1-206ENST00000427645 ODAMA1E959 279 aa6.85□□□□□ -1.31
SMARCAL1-206ENST00000427645 FABP7O15540 132 aa6.85□□□□□ -1.31
SMARCAL1-206ENST00000427645 SPINT2O43291 252 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms