RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 FAM90A22PA8MWA6 464 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM90A12PA8MX19 464 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM90A5PA8MXJ8 464 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM90A23PA8MXZ1 464 aa12□□□□□ -0.49
RPL28-202ENST00000426763 CLDN14O95500 239 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM90A15PP0C7V4 464 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM90A13PP0C7W8 464 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM90A14PP0C7W9 464 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FAM90A24PP0C7X0 464 aa12□□□□□ -0.49
RPL28-202ENST00000426763 ATP6V1FQ16864 119 aa12□□□□□ -0.49
RPL28-202ENST00000426763 VWA1Q6PCB0 445 aa12□□□□□ -0.49
RPL28-202ENST00000426763 OR2C3Q8N628 320 aa12□□□□□ -0.49
RPL28-202ENST00000426763 GCSAMQ8N6F7 178 aa12□□□□□ -0.49
RPL28-202ENST00000426763 TEX29Q8N6K0 151 aa12□□□□□ -0.49
RPL28-202ENST00000426763 SNX22Q96L94 193 aa12□□□□□ -0.49
RPL28-202ENST00000426763 HARBI1Q96MB7 349 aa12□□□□□ -0.49
RPL28-202ENST00000426763 AAMDCQ9H7C9 122 aa12□□□□□ -0.49
RPL28-202ENST00000426763 SPTBP11277 2137 aa12□□□□□ -0.49
RPL28-202ENST00000426763 SSX4O60224 188 aa12□□□□□ -0.49
RPL28-202ENST00000426763 KLF7O75840 302 aaPredicted RBP12□□□□□ -0.49
RPL28-202ENST00000426763 VDAC1P21796 283 aa12□□□□□ -0.49
RPL28-202ENST00000426763 SLC6A1P30531 599 aa12□□□□□ -0.49
RPL28-202ENST00000426763 LINC01590Q5TEZ4 76 aa12□□□□□ -0.49
RPL28-202ENST00000426763 CLEC18BQ6UXF7 455 aa12□□□□□ -0.49
RPL28-202ENST00000426763 DUSP18Q8NEJ0 188 aa12□□□□□ -0.49
RPL28-202ENST00000426763 COA4Q9NYJ1 87 aa12□□□□□ -0.49
RPL28-202ENST00000426763 CKAP5Q14008 2032 aa12□□□□□ -0.49
RPL28-202ENST00000426763 NQO2P16083 231 aa12□□□□□ -0.49
RPL28-202ENST00000426763 OR5C1Q8NGR4 320 aa12□□□□□ -0.49
RPL28-202ENST00000426763 FBLIM1Q8WUP2 373 aa12□□□□□ -0.49
RPL28-202ENST00000426763 ZNF552Q9H707 407 aaPredicted RBP12□□□□□ -0.49
RPL28-202ENST00000426763 SLC2A9Q9NRM0 540 aa12□□□□□ -0.49
RPL28-202ENST00000426763 PRNDQ9UKY0 176 aa12□□□□□ -0.49
RPL28-202ENST00000426763 APC2O95996 2303 aa12□□□□□ -0.49
RPL28-202ENST00000426763 CACNA1EQ15878 2313 aa12□□□□□ -0.49
RPL28-202ENST00000426763 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 B9A039 149 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 BTN1A1Q13410 526 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 RELL2Q8NC24 303 aaPredicted RBP11.99□□□□□ -0.49
RPL28-202ENST00000426763 C1orf162Q8NEQ5 155 aaPredicted RBP11.99□□□□□ -0.49
RPL28-202ENST00000426763 OR4F17Q8NGA8 305 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 ZNF331Q9NQX6 463 aaPredicted RBP11.99□□□□□ -0.49
RPL28-202ENST00000426763 SVILO95425 2214 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 OR2H2O95918 312 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 THY1P04216 161 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 NAT2P11245 290 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 PRSS54Q6PEW0 395 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 SPNS3Q6ZMD2 512 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 ZNF826PQ6ZT77 177 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 OR52L2PQ8NGH6 319 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 LINC01560Q8TB33 94 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 ZNF705FA8MVS1 300 aaPredicted RBP11.99□□□□□ -0.49
RPL28-202ENST00000426763 K7N7A8 449 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 SYNGR1O43759 233 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 RAMP1O60894 148 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 MPC2O95563 127 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 ZNF705DP0CH99 300 aaPredicted RBP11.99□□□□□ -0.49
RPL28-202ENST00000426763 ZNF705BP0CI00 300 aaPredicted RBP11.99□□□□□ -0.49
RPL28-202ENST00000426763 NAAAQ02083 359 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 FFAR4Q5NUL3 377 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 MS4A7Q9GZW8 240 aaPredicted RBP11.99□□□□□ -0.49
RPL28-202ENST00000426763 ZNF629Q9UEG4 869 aaPredicted RBP11.99□□□□□ -0.49
RPL28-202ENST00000426763 FAM24AA6NFZ4 105 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 FCGR3AP08637 254 aa11.99□□□□□ -0.49
RPL28-202ENST00000426763 PPP1CCP36873 323 aaKnown RBP11.99□□□□□ -0.49
RPL28-202ENST00000426763 RPUSD4Q96CM3 377 aaKnown RBP11.99□□□□□ -0.49
RPL28-202ENST00000426763 CNN1P51911 297 aaKnown RBP11.98□□□□□ -0.49
RPL28-202ENST00000426763 H3F3CQ6NXT2 135 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 HIST2H3AQ71DI3 136 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 BSCL2Q96G97 398 aaPredicted RBP11.98□□□□□ -0.49
RPL28-202ENST00000426763 PGLYRP3Q96LB9 341 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 HDHD3Q9BSH5 251 aaPredicted RBP11.98□□□□□ -0.49
RPL28-202ENST00000426763 H7BYZ3 331 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 RAB29O14966 203 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 SYNGR2O43760 224 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 ICMTO60725 284 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 METTL15P1P0C7V9 234 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 MPV17P39210 176 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 ACSF3Q4G176 576 aaPredicted RBP11.98□□□□□ -0.49
RPL28-202ENST00000426763 TMEM41BQ5BJD5 291 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 WDYHV1Q96HA8 205 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 TXN2Q99757 166 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 KLF4O43474 513 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 ATP5J2P56134 94 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 FAM3AP98173 230 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 EXOSC2Q13868 293 aaKnown RBP11.98□□□□□ -0.49
RPL28-202ENST00000426763 SAXO1Q8IYX7 474 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 MUC15Q8N387 334 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 RXFP4Q8TDU9 374 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 ABHD14AQ9BUJ0 271 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 ARG1P05089 322 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 SLC25A42Q86VD7 318 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 CXorf58Q96LI9 332 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 C20orf24Q9BUV8 137 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 G6PC2Q9NQR9 355 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 ASXL3Q9C0F0 2248 aa11.98□□□□□ -0.49
RPL28-202ENST00000426763 SH2D7A6NKC9 451 aaPredicted RBP11.97□□□□□ -0.49
RPL28-202ENST00000426763 OR5M8Q8NGP6 311 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 Q9N2K0 584 aa11.97□□□□□ -0.49
RPL28-202ENST00000426763 ZMIZ1Q9ULJ6 1067 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms