RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 KCTD12Q96CX2 325 aaKnown RBP19.99■□□□□ 0.79
VEGFA-209ENST00000425836 A0A1W2PRD5 423 aa19.98■□□□□ 0.79
VEGFA-209ENST00000425836 A0A1W2PRF3 423 aa19.98■□□□□ 0.79
VEGFA-209ENST00000425836 A0A1W2PRM7 423 aa19.98■□□□□ 0.79
VEGFA-209ENST00000425836 NPIPB11E5RHQ5 1161 aa19.98■□□□□ 0.79
VEGFA-209ENST00000425836 COX7A1P24310 79 aa19.98■□□□□ 0.79
VEGFA-209ENST00000425836 FPR2P25090 351 aa19.98■□□□□ 0.79
VEGFA-209ENST00000425836 SSTR5P35346 364 aa19.98■□□□□ 0.79
VEGFA-209ENST00000425836 SCGB2A2Q13296 93 aa19.98■□□□□ 0.79
VEGFA-209ENST00000425836 OLFML2AQ68BL7 652 aa19.98■□□□□ 0.79
VEGFA-209ENST00000425836 BAIAP2L2Q6UXY1 529 aa19.98■□□□□ 0.79
VEGFA-209ENST00000425836 PNKDQ8N490 385 aa19.98■□□□□ 0.79
VEGFA-209ENST00000425836 RFESDQ8TAC1 157 aa19.98■□□□□ 0.79
VEGFA-209ENST00000425836 ISOC1Q96CN7 298 aa19.98■□□□□ 0.79
VEGFA-209ENST00000425836 ZFHX3Q15911 3703 aa19.97■□□□□ 0.79
VEGFA-209ENST00000425836 C15orf65H3BRN8 121 aa19.97■□□□□ 0.79
VEGFA-209ENST00000425836 NAPSAO96009 420 aa19.97■□□□□ 0.79
VEGFA-209ENST00000425836 GNB3P16520 340 aa19.97■□□□□ 0.79
VEGFA-209ENST00000425836 RCC1P18754 421 aaPredicted RBP19.97■□□□□ 0.79
VEGFA-209ENST00000425836 PIP4P2Q8N4L2 257 aa19.97■□□□□ 0.79
VEGFA-209ENST00000425836 HDHD3Q9BSH5 251 aaPredicted RBP19.97■□□□□ 0.79
VEGFA-209ENST00000425836 MBNL3Q9NUK0 354 aaKnown RBP19.97■□□□□ 0.79
VEGFA-209ENST00000425836 NIPBLQ6KC79 2804 aaeCLIP19.97■□□□□ 0.792e-6■■□□□ 11.5
VEGFA-209ENST00000425836 H3BMQ9 156 aa19.96■□□□□ 0.79
VEGFA-209ENST00000425836 MFNGO00587 321 aa19.96■□□□□ 0.79
VEGFA-209ENST00000425836 NOL3O60936 208 aaKnown RBP19.96■□□□□ 0.79
VEGFA-209ENST00000425836 HIST1H1DP16402 221 aaKnown RBP19.96■□□□□ 0.79
VEGFA-209ENST00000425836 TUSC1Q2TAM9 212 aa19.96■□□□□ 0.79
VEGFA-209ENST00000425836 OR13D1Q8NGV5 346 aa19.96■□□□□ 0.79
VEGFA-209ENST00000425836 KIRREL1Q96J84 757 aa19.96■□□□□ 0.79
VEGFA-209ENST00000425836 SLC6A7Q99884 636 aa19.96■□□□□ 0.79
VEGFA-209ENST00000425836 SUCNR1Q9BXA5 334 aa19.96■□□□□ 0.79
VEGFA-209ENST00000425836 TMEM133Q9H2Q1 129 aa19.96■□□□□ 0.79
VEGFA-209ENST00000425836 ZMAT3Q9HA38 289 aaKnown RBP19.96■□□□□ 0.79
VEGFA-209ENST00000425836 IDI2-AS1Q9NZ38 188 aa19.96■□□□□ 0.79
VEGFA-209ENST00000425836 NAV3Q8IVL0 2385 aa19.96■□□□□ 0.79
VEGFA-209ENST00000425836 NPFFO15130 113 aa19.95■□□□□ 0.78
VEGFA-209ENST00000425836 ORC5O43913 435 aa19.95■□□□□ 0.78
VEGFA-209ENST00000425836 C6orf183Q5T699 404 aa19.95■□□□□ 0.78
VEGFA-209ENST00000425836 Q6ZPA2 131 aa19.95■□□□□ 0.78
VEGFA-209ENST00000425836 ARL11Q969Q4 196 aa19.95■□□□□ 0.78
VEGFA-209ENST00000425836 RIMS4Q9H426 269 aaPredicted RBP19.95■□□□□ 0.78
VEGFA-209ENST00000425836 A0A075B6Q4 140 aa19.95■□□□□ 0.78
VEGFA-209ENST00000425836 C12orf77C9JDV5 145 aa19.95■□□□□ 0.78
VEGFA-209ENST00000425836 SCGNO76038 276 aa19.95■□□□□ 0.78
VEGFA-209ENST00000425836 OR52W1Q6IF63 320 aa19.95■□□□□ 0.78
VEGFA-209ENST00000425836 OR11H6Q8NGC7 330 aa19.95■□□□□ 0.78
VEGFA-209ENST00000425836 UBALD1Q8TB05 177 aa19.95■□□□□ 0.78
VEGFA-209ENST00000425836 CMSS1Q9BQ75 279 aaKnown RBP19.95■□□□□ 0.78
VEGFA-209ENST00000425836 OCEL1Q9H607 264 aa19.95■□□□□ 0.78
VEGFA-209ENST00000425836 CHMP1AQ9HD42 196 aaPredicted RBP19.95■□□□□ 0.78
VEGFA-209ENST00000425836 DSCAML1Q8TD84 2053 aa19.95■□□□□ 0.78
VEGFA-209ENST00000425836 TRBV6-6A0A0A6YYG2 114 aa19.94■□□□□ 0.78
VEGFA-209ENST00000425836 ZNF182P17025 639 aaPredicted RBP19.94■□□□□ 0.78
VEGFA-209ENST00000425836 DYNC1I2Q13409 638 aaKnown RBP19.94■□□□□ 0.78
VEGFA-209ENST00000425836 CDNFQ49AH0 187 aa19.94■□□□□ 0.78
VEGFA-209ENST00000425836 UTF1Q5T230 341 aa19.94■□□□□ 0.78
VEGFA-209ENST00000425836 ZNF880Q6PDB4 577 aa19.94■□□□□ 0.78
VEGFA-209ENST00000425836 TRAT1Q6PIZ9 186 aa19.94■□□□□ 0.78
VEGFA-209ENST00000425836 SAMD12Q8N8I0 201 aa19.94■□□□□ 0.78
VEGFA-209ENST00000425836 OR10A7Q8NGE5 316 aa19.94■□□□□ 0.78
VEGFA-209ENST00000425836 ACOT12Q8WYK0 555 aa19.94■□□□□ 0.78
VEGFA-209ENST00000425836 RBM38Q9H0Z9 239 aaKnown RBP19.94■□□□□ 0.78
VEGFA-209ENST00000425836 ABCG5Q9H222 651 aa19.94■□□□□ 0.78
VEGFA-209ENST00000425836 TAF9BQ9HBM6 251 aa19.94■□□□□ 0.78
VEGFA-209ENST00000425836 COMMD3Q9UBI1 195 aa19.94■□□□□ 0.78
VEGFA-209ENST00000425836 IGHV2-26A0A0B4J1V2 119 aa19.93■□□□□ 0.78
VEGFA-209ENST00000425836 NFYBP25208 207 aa19.93■□□□□ 0.78
VEGFA-209ENST00000425836 LTC4SQ16873 150 aa19.93■□□□□ 0.78
VEGFA-209ENST00000425836 ABHD12Q8N2K0 398 aa19.93■□□□□ 0.78
VEGFA-209ENST00000425836 ZNF48Q96MX3 618 aaPredicted RBP19.93■□□□□ 0.78
VEGFA-209ENST00000425836 C12orf4Q9NQ89 552 aa19.93■□□□□ 0.78
VEGFA-209ENST00000425836 NF1P21359 2839 aa19.93■□□□□ 0.78
VEGFA-209ENST00000425836 A0A087X0M5 115 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 A0A0U1RQK1 487 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 A0A1B0GX30 115 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 FAM172BPA6NC97 362 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 SERPINE3A8MV23 424 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 SAA4P35542 130 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 ARL6IP1Q15041 203 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 DEFB112Q30KQ8 113 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 MIDNQ504T8 468 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 UBE2NLQ5JXB2 153 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 C5orf24Q7Z6I8 188 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 PRIMA1Q86XR5 153 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 OR1L1Q8NH94 360 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 DYNC2LI1Q8TCX1 351 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 PHF21AQ96BD5 680 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.92■□□□□ 0.789e-6■□□□□ 9.4
VEGFA-209ENST00000425836 KCNIP1Q9NZI2 227 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 ELF5Q9UKW6 265 aaPredicted RBP19.92■□□□□ 0.78
VEGFA-209ENST00000425836 SETD2Q9BYW2 2564 aaPredicted RBP19.92■□□□□ 0.78
VEGFA-209ENST00000425836 MXRA5Q9NR99 2828 aa19.92■□□□□ 0.78
VEGFA-209ENST00000425836 CCDC160A6NGH7 325 aa19.91■□□□□ 0.78
VEGFA-209ENST00000425836 ODF3BA8MYP8 253 aa19.91■□□□□ 0.78
VEGFA-209ENST00000425836 SPINT2O43291 252 aa19.91■□□□□ 0.78
VEGFA-209ENST00000425836 IFNA2P01563 188 aa19.91■□□□□ 0.78
VEGFA-209ENST00000425836 HBZP02008 142 aa19.91■□□□□ 0.78
VEGFA-209ENST00000425836 CD3GP09693 182 aa19.91■□□□□ 0.78
VEGFA-209ENST00000425836 CD34P28906 385 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms