RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ORC5O43913 435 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ZNF780AO75290 641 aaPredicted RBP9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 IGHG4P01861 327 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 CD40LGP29965 261 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 GBX2P52951 348 aaPredicted RBP9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ZP1P60852 638 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ZNF616Q08AN1 781 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 GPR176Q14439 515 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 CDK5R1Q15078 307 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 TMEM30BQ3MIR4 351 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 LINC00596Q86U02 117 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 C8orf31Q8N9H6 132 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 UBE2E2Q96LR5 201 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 S1PR3Q99500 378 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 DPCDQ9BVM2 203 aaPredicted RBP9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ST3GAL6Q9Y274 331 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 VSIG4Q9Y279 399 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 OR7C1O76099 320 aaPredicted RBP9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 FADS2O95864 444 aaKnown RBP9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 REG1BP48304 166 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ISL1P61371 349 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 PPP3R1P63098 170 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 PAX5Q02548 391 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 DEFB136Q30KP8 78 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ATAD3CQ5T2N8 411 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 CASC10Q5T4H9 136 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 RSBN1Q5VWQ0 802 aaPredicted RBP9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 PARP16Q8N5Y8 322 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 LINC00311Q8N616 119 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 RNF152Q8N8N0 203 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 Q8N9W7 124 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 OR6Q1Q8NGQ2 317 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 C4orf36Q96KX1 117 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 Q96MT0 163 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 RCHY1Q96PM5 261 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 CIB1Q99828 191 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 GABARAPL1Q9H0R8 117 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 SPACA1Q9HBV2 294 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 GNG12Q9UBI6 72 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ZNF107Q9UII5 783 aaPredicted RBP9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 TRAPPC2LQ9UL33 140 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 NBEAL2Q6ZNJ1 2754 aa9.62□□□□□ -0.87
HLA-DQB3-203ENST00000425319 TRAV24A0A0B4J272 114 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 A0A1W2PPE3 182 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 MCRIP1C9JLW8 97 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 OVOL1O14753 267 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ARPC1BO15143 372 aaKnown RBP9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 SAP30O75446 220 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 EPHA2P29317 976 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 DIAPH2-AS1Q14236 149 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 GALEQ14376 348 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 TRAT1Q6PIZ9 186 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 SUMF2Q8NBJ7 301 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 OR52N1Q8NH53 320 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 RTN4IP1Q8WWV3 396 aaPredicted RBP9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 KCTD7Q96MP8 289 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 OR4C12Q96R67 309 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ZNF251Q9BRH9 671 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 KCNIP1Q9NZI2 227 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 KIAA1456Q9P272 454 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 SCOCQ9UIL1 159 aa9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 MRPS28Q9Y2Q9 187 aaKnown RBP9.61□□□□□ -0.87
HLA-DQB3-203ENST00000425319 LINC01548A6NM66 108 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 OR4C45A6NMZ5 311 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 AIPO00170 330 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 IGF1P05019 195 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 SSTR5P35346 364 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 GABPB1Q06547 395 aaPredicted RBP9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 TMEM267Q0VDI3 215 aaPredicted RBP9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ZSCAN26Q16670 478 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 MPV17LQ2QL34 196 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 C6orf183Q5T699 404 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 STEAP3Q658P3 488 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 AMIGO2Q86SJ2 522 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 SYS1Q8N2H4 156 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 OR51A4Q8NGJ6 313 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 CENPNQ96H22 339 aaPredicted RBP9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ELOVL1Q9BW60 279 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 OR51J1Q9H342 316 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 GFOD1Q9NXC2 390 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ZNF580Q9UK33 172 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 RNF150Q9ULK6 438 aa9.6□□□□□ -0.87
HLA-DQB3-203ENST00000425319 GTF2F2P13984 249 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 PSMB8P28062 276 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 NANOS3P60323 173 aaKnown RBP9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 MMDQ15546 238 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 NKAPLQ5M9Q1 402 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 SLC25A30Q5SVS4 291 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 C1orf146Q5VVC0 180 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 LPCAT4Q643R3 524 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 LHFPL3Q86UP9 236 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 OR51A2Q8NGJ7 313 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 PLPPR1Q8TBJ4 325 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 GPR148Q8TDV2 347 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 CCDC107Q8WV48 283 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 FLYWCH2Q96CP2 140 aaKnown RBP9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 PELI1Q96FA3 418 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ALG8Q9BVK2 526 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 GABARAPL3Q9BY60 117 aa9.59□□□□□ -0.87
HLA-DQB3-203ENST00000425319 CST11Q9H112 138 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms