RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 MRPS24Q96EL2 167 aaKnown RBP17.19■□□□□ 0.34
CDCP1-202ENST00000425231 ERGIC3Q9Y282 383 aa17.19■□□□□ 0.34
CDCP1-202ENST00000425231 AMMECR1Q9Y4X0 333 aaPredicted RBP17.19■□□□□ 0.34
CDCP1-202ENST00000425231 ADARB2-AS1A8MUL3 147 aa17.18■□□□□ 0.34
CDCP1-202ENST00000425231 C15orf65H3BRN8 121 aa17.18■□□□□ 0.34
CDCP1-202ENST00000425231 PEX14O75381 377 aa17.18■□□□□ 0.34
CDCP1-202ENST00000425231 CDK1P06493 297 aa17.18■□□□□ 0.34
CDCP1-202ENST00000425231 DIAPH2-AS1Q14236 149 aa17.18■□□□□ 0.34
CDCP1-202ENST00000425231 TOMM40LQ969M1 308 aa17.18■□□□□ 0.34
CDCP1-202ENST00000425231 RPEQ96AT9 228 aa17.18■□□□□ 0.34
CDCP1-202ENST00000425231 CITED2Q99967 270 aaPredicted RBP17.18■□□□□ 0.34
CDCP1-202ENST00000425231 RCC2Q9P258 522 aaKnown RBP17.18■□□□□ 0.34
CDCP1-202ENST00000425231 MT-ND4P03905 459 aa17.17■□□□□ 0.34
CDCP1-202ENST00000425231 GNG10P50151 68 aa17.17■□□□□ 0.34
CDCP1-202ENST00000425231 EMX1Q04741 257 aaPredicted RBP17.17■□□□□ 0.34
CDCP1-202ENST00000425231 MADCAM1Q13477 382 aa17.17■□□□□ 0.34
CDCP1-202ENST00000425231 NSUN5P1Q3KNT7 163 aa17.17■□□□□ 0.34
CDCP1-202ENST00000425231 ABCA11PQ4W5N1 156 aa17.17■□□□□ 0.34
CDCP1-202ENST00000425231 C6orf141Q5SZD1 244 aa17.17■□□□□ 0.34
CDCP1-202ENST00000425231 ZNF497Q6ZNH5 498 aa17.17■□□□□ 0.34
CDCP1-202ENST00000425231 NDUFA11Q86Y39 141 aa17.17■□□□□ 0.34
CDCP1-202ENST00000425231 THNSL2Q86YJ6 484 aa17.17■□□□□ 0.34
CDCP1-202ENST00000425231 C1QL4Q86Z23 238 aa17.17■□□□□ 0.34
CDCP1-202ENST00000425231 NRG4Q8WWG1 115 aa17.17■□□□□ 0.34
CDCP1-202ENST00000425231 A0A1W2PPI3 338 aa17.16■□□□□ 0.34
CDCP1-202ENST00000425231 PTGES3LE9PB15 166 aa17.16■□□□□ 0.34
CDCP1-202ENST00000425231 GP2P55259 537 aaKnown RBP17.16■□□□□ 0.34
CDCP1-202ENST00000425231 INSL4Q14641 139 aa17.16■□□□□ 0.34
CDCP1-202ENST00000425231 AWAT2Q6E213 333 aa17.16■□□□□ 0.34
CDCP1-202ENST00000425231 UNQ9370/PRO34162Q6UXP9 181 aa17.16■□□□□ 0.34
CDCP1-202ENST00000425231 TMEM104Q8NE00 496 aa17.16■□□□□ 0.34
CDCP1-202ENST00000425231 CCDC107Q8WV48 283 aa17.16■□□□□ 0.34
CDCP1-202ENST00000425231 CAPSLQ8WWF8 208 aa17.16■□□□□ 0.34
CDCP1-202ENST00000425231 ARL11Q969Q4 196 aa17.16■□□□□ 0.34
CDCP1-202ENST00000425231 SPACA1Q9HBV2 294 aa17.16■□□□□ 0.34
CDCP1-202ENST00000425231 PLXNB1O43157 2135 aa17.16■□□□□ 0.34
CDCP1-202ENST00000425231 A0A1W2PPE3 182 aa17.15■□□□□ 0.34
CDCP1-202ENST00000425231 ORC5O43913 435 aa17.15■□□□□ 0.34
CDCP1-202ENST00000425231 LPLP06858 475 aa17.15■□□□□ 0.34
CDCP1-202ENST00000425231 FAM106CPP0CH98 169 aa17.15■□□□□ 0.34
CDCP1-202ENST00000425231 MAPK3P27361 379 aaPredicted RBP17.15■□□□□ 0.34
CDCP1-202ENST00000425231 OR5AU1Q8NGC0 362 aa17.15■□□□□ 0.34
CDCP1-202ENST00000425231 OR52M1Q8NGK5 317 aa17.15■□□□□ 0.34
CDCP1-202ENST00000425231 OR56B4Q8NH76 319 aa17.15■□□□□ 0.34
CDCP1-202ENST00000425231 NEK7Q8TDX7 302 aa17.15■□□□□ 0.34
CDCP1-202ENST00000425231 SGCDQ92629 289 aa17.15■□□□□ 0.34
CDCP1-202ENST00000425231 THRSPQ92748 146 aa17.15■□□□□ 0.34
CDCP1-202ENST00000425231 BANF2Q9H503 90 aa17.15■□□□□ 0.34
CDCP1-202ENST00000425231 LSM2Q9Y333 95 aaKnown RBP17.15■□□□□ 0.34
CDCP1-202ENST00000425231 SH2D7A6NKC9 451 aaPredicted RBP17.14■□□□□ 0.33
CDCP1-202ENST00000425231 SNRNP70P08621 437 aaKnown RBP17.14■□□□□ 0.33
CDCP1-202ENST00000425231 AQP4P55087 323 aa17.14■□□□□ 0.33
CDCP1-202ENST00000425231 LOXL3P58215 753 aa17.14■□□□□ 0.33
CDCP1-202ENST00000425231 CD83Q01151 205 aa17.14■□□□□ 0.33
CDCP1-202ENST00000425231 FAM53AQ6NSI3 398 aaPredicted RBP17.14■□□□□ 0.33
CDCP1-202ENST00000425231 DRAM1Q8N682 238 aa17.14■□□□□ 0.33
CDCP1-202ENST00000425231 NKAIN3Q8N8D7 197 aa17.14■□□□□ 0.33
CDCP1-202ENST00000425231 UBALD1Q8TB05 177 aa17.14■□□□□ 0.33
CDCP1-202ENST00000425231 UQCC2Q9BRT2 126 aa17.14■□□□□ 0.33
CDCP1-202ENST00000425231 MND1Q9BWT6 205 aa17.14■□□□□ 0.33
CDCP1-202ENST00000425231 PRKDCP78527 4128 aaKnown RBP17.14■□□□□ 0.33
CDCP1-202ENST00000425231 TGP01266 2768 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 MCRIP1C9JLW8 97 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 G3V4G9 280 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 AIPO00170 330 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 MGMTP16455 207 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 VHLP40337 213 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 RAB7AP51149 207 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 SPHARQ15513 63 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 ACSM3Q53FZ2 586 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 FAM27D1Q5T7N8 215 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 SIGIRRQ6IA17 410 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 RAB12Q6IQ22 244 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 OR8H3Q8N146 312 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 GAPTQ8N292 157 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 MS4A15Q8N5U1 240 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 OR10X1Q8NGY0 326 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 MYDGFQ969H8 173 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 Q96M66 194 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 SELENOIQ9C0D9 397 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 FAM90A10PA6NDY2 464 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 FAM90A7PA6NKC0 464 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 FAM90A23PA8MXZ1 464 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 M0QZK8 103 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 SDCBPO00560 298 aaPredicted RBP17.13■□□□□ 0.33
CDCP1-202ENST00000425231 GABPB1Q06547 395 aaPredicted RBP17.13■□□□□ 0.33
CDCP1-202ENST00000425231 TCTEX1D4Q5JR98 221 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 SYT6Q5T7P8 510 aaPredicted RBP17.13■□□□□ 0.33
CDCP1-202ENST00000425231 CENPVQ7Z7K6 275 aaPredicted RBP17.13■□□□□ 0.33
CDCP1-202ENST00000425231 LINC00311Q8N616 119 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 C8orf31Q8N9H6 132 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 CYYR1Q96J86 154 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 GFOD1Q9NXC2 390 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 SCN3BQ9NY72 215 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 ETAA1Q9NY74 926 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 PEX16Q9Y5Y5 336 aa17.13■□□□□ 0.33
CDCP1-202ENST00000425231 CRTAPO75718 401 aaPredicted RBP17.12■□□□□ 0.33
CDCP1-202ENST00000425231 SC5DO75845 299 aa17.12■□□□□ 0.33
CDCP1-202ENST00000425231 SLC35A2P78381 396 aa17.12■□□□□ 0.33
CDCP1-202ENST00000425231 ZNF816Q0VGE8 651 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms