RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 EMP1P54849 157 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 C1orf174Q8IYL3 243 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 OR10AC1Q8NH08 325 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 MPLP40238 635 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 TMEM97Q5BJF2 176 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 LRRC3BQ96PB8 259 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF286AQ9HBT8 521 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF257Q9Y2Q1 563 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 SCGB1C2P0DMR2 95 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 RAET1LQ5VY80 246 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 BRICD5Q6PL45 260 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 OR10G3Q8NGC4 313 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 SGMS2Q8NHU3 365 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 MRPS18AQ9NVS2 196 aaKnown RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 TMEM176BQ3YBM2 270 aaPredicted RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 OR51B4Q9Y5P0 310 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 EN2P19622 333 aaPredicted RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 OR2T6Q8NHC8 308 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 hDV102S1A0JD36 115 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 H3BVH4 76 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 POU2F2P09086 479 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 CFHR2P36980 270 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 MRPL54Q6P161 138 aaKnown RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 CD300LDQ6UXZ3 194 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 RBM24Q9BX46 236 aaKnown RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 TMEM106BQ9NUM4 274 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 PEF1Q9UBV8 284 aaKnown RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 ALPK2Q86TB3 2170 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 MDFIC2A0A1B0GVS7 189 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 CLEC3AO75596 197 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 SRP14P37108 136 aaKnown RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 PMCHL1Q16048 86 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 C9orf50Q5SZB4 431 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 A0A0G2JMZ2 1700 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 LRRC37A2A6NM11 1700 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 A0A1W2PRU2 124 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 A4D1N5 150 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 LGI3Q8N145 548 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 SCGB1A1P11684 91 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 ECI1P42126 302 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 MEF2CQ06413 473 aaPredicted RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 MYADML2A6NDP7 307 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 CTAG2O75638 210 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 LYZL2Q7Z4W2 148 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 CISD2Q8N5K1 135 aaKnown RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 WDR34Q96EX3 536 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 COL16A1Q07092 1604 aaPredicted RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 CA2P00918 260 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 BLVRBP30043 206 aaPredicted RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 AGERQ15109 404 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 ZFAND6Q6FIF0 208 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 MCRIP2Q9BUT9 160 aaKnown RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 KCNE3Q9Y6H6 103 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 SERINC4A6NH21 518 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 BMPR1BO00238 502 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 HMGN4O00479 90 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 IGLC2P0DOY2 106 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 IGLC3P0DOY3 106 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 PAQR4Q8N4S7 273 aaPredicted RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 RTN4RQ9BZR6 473 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 HRASLS2Q9NWW9 162 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 FBXL7Q9UJT9 491 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 PLXNB2O15031 1838 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 P2RY10O00398 339 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 HIST1H1EP10412 219 aaKnown RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 LRRC75BQ2VPJ9 315 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 CD300EQ496F6 205 aaPredicted RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 NEIL1Q96FI4 390 aaPredicted RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 PAAF1Q9BRP4 392 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 PSME4Q14997 1843 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 AADACP22760 399 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 ATP6V0CP27449 155 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 GPR12P47775 334 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 FAM222BQ8WU58 562 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 PRRG4Q9BZD6 226 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 CES1P1Q9UKY3 287 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 B9D1Q9UPM9 204 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 MTCL1Q9Y4B5 1905 aaKnown RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 ZSWIM8A7E2V4 1837 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 RPS27P42677 84 aaKnown RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 TEX43Q6ZNM6 134 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 OR2L13Q8N349 312 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 OR10X1Q8NGY0 326 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 HOXD9P28356 352 aaPredicted RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 RPS4XP62701 263 aaKnown RBP2.99□□□□□ -1.93
SYNE1-212ENST00000423061 AQP3Q92482 292 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 KIAA1456Q9P272 454 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 H0Y980 276 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF253O75346 499 aa2.99□□□□□ -1.93
SYNE1-212ENST00000423061 SLC22A20A6NK97 555 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 SRSF10O75494 262 aaKnown RBP2.98□□□□□ -1.93
SYNE1-212ENST00000423061 TYMSP04818 313 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 UBE2G1P62253 170 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF85Q03923 595 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 PRSS53Q2L4Q9 553 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 TMEM128Q5BJH2 165 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 TXNDC8Q6A555 127 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 BATF2Q8N1L9 274 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 PSMG3Q9BT73 122 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-212ENST00000423061 PTGESO14684 152 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms