RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 C11orf53Q8IXP5 236 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 SCNM1Q9BWG6 230 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 TMEM100Q9NV29 134 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 ATP23Q9Y6H3 246 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 USF3Q68DE3 2245 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 CENPEQ02224 2701 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 TRBV6-7A0A0A0MS04 114 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 IGHV2OR16-5A0A0B4J2B6 119 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 M0R1B8 84 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 IFNA21P01568 189 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 HKR1P10072 659 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 RAC2P15153 192 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 LINC00205P59089 165 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 UBA52P62987 128 aaKnown RBP7.44□□□□□ -1.22
SNCA-206ENST00000420646 AESQ08117 197 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 PRR30Q53SZ7 412 aaPredicted RBP7.44□□□□□ -1.22
SNCA-206ENST00000420646 IGF2-ASQ6U949 168 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 LIAT1Q6ZQX7 453 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 BHLHA15Q7RTS1 189 aaPredicted RBP7.44□□□□□ -1.22
SNCA-206ENST00000420646 ZNF565Q8N9K5 539 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 NRIP2Q9BQI9 281 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 DCTN5Q9BTE1 182 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 RSRP1Q9BUV0 290 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 PURGQ9UJV8 347 aaKnown RBP7.44□□□□□ -1.22
SNCA-206ENST00000420646 TRAPPC2LQ9UL33 140 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 RNF150Q9ULK6 438 aa7.44□□□□□ -1.22
SNCA-206ENST00000420646 ATP6V1G2-DDX39BF2Z307 99 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 NUPL2O15504 423 aaKnown RBP7.43□□□□□ -1.22
SNCA-206ENST00000420646 PTBP3O95758 552 aaKnown RBP7.43□□□□□ -1.22
SNCA-206ENST00000420646 IGHV3-13P01766 116 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 IGHV3-7P01780 117 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 RPL12P30050 165 aaKnown RBP7.43□□□□□ -1.22
SNCA-206ENST00000420646 SRSF3P84103 164 aaKnown RBP7.43□□□□□ -1.22
SNCA-206ENST00000420646 CXorf66Q5JRM2 361 aaPredicted RBP7.43□□□□□ -1.22
SNCA-206ENST00000420646 FAM201AQ5SY85 155 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 DPPA2Q7Z7J5 298 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 OR1S2Q8NGQ3 325 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 LRRC20Q8TCA0 184 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 MARVELD3Q96A59 401 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 SYT3Q9BQG1 590 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 OPA3Q9H6K4 179 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 ASF1BQ9NVP2 202 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 PPP1R3CQ9UQK1 317 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 TP53TG5Q9Y2B4 290 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 UBE2J1Q9Y385 318 aaPredicted RBP7.43□□□□□ -1.22
SNCA-206ENST00000420646 LRP5LA4QPB2 252 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 OR5H1A6NKK0 313 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 HSPA12AO43301 675 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 OMGP23515 440 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 KCNJ3P48549 501 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 ERVK11-1P61568 191 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 NHLH2Q02577 135 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 OR2Z1Q8NG97 314 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 RFESDQ8TAC1 157 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 NARS2Q96I59 477 aaKnown RBP7.43□□□□□ -1.22
SNCA-206ENST00000420646 BARX1Q9HBU1 254 aaPredicted RBP7.43□□□□□ -1.22
SNCA-206ENST00000420646 PFDN2Q9UHV9 154 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 ZDHHC8Q9ULC8 765 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 IQCF6A8MYZ5 107 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 K7EPK0 472 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 ATXN7O15265 892 aaPredicted RBP7.43□□□□□ -1.22
SNCA-206ENST00000420646 OR8U9P0C7N5 309 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 PGA5P0DJD9 388 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 ZNF16P17020 682 aaPredicted RBP7.43□□□□□ -1.22
SNCA-206ENST00000420646 TMEM33P57088 247 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 POLR2GP62487 172 aaKnown RBP eCLIP7.43□□□□□ -1.22
SNCA-206ENST00000420646 LTC4SQ16873 150 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 BAP18Q8IXM2 172 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 FAM71E2Q8N5Q1 922 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 OR8G5Q8NG78 346 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 OR8U1Q8NH10 309 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 OR10J5Q8NHC4 309 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 LILRB1Q8NHL6 650 aaPredicted RBP7.43□□□□□ -1.22
SNCA-206ENST00000420646 GALNT14Q96FL9 552 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 C18orf12Q96KH6 178 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 PKIBQ9C010 78 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 TMEM231Q9H6L2 316 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 TAS2R3Q9NYW6 316 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 PLA2G2EQ9NZK7 142 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 PCDHB10Q9UN67 800 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 MEMO1Q9Y316 297 aa7.43□□□□□ -1.22
SNCA-206ENST00000420646 IGHV3OR15-7A0A075B7D8 119 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 FAM90A10PA6NDY2 464 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 FAM90A18PA6NE21 464 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 FAM90A16PA6NEW6 464 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 FAM90A20PA6NIJ5 464 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 FAM90A8PA6NJQ4 464 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 FAM90A7PA6NKC0 464 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 FAM90A22PA8MWA6 464 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 FAM90A12PA8MX19 464 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 FAM90A5PA8MXJ8 464 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 FAM90A23PA8MXZ1 464 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 AGPAT2O15120 278 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 DEDDO75618 318 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 FAM90A15PP0C7V4 464 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 FAM90A13PP0C7W8 464 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 FAM90A14PP0C7W9 464 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 FAM90A24PP0C7X0 464 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 EPHA1P21709 976 aa7.42□□□□□ -1.22
SNCA-206ENST00000420646 IGFL3Q6UXB1 125 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms