RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TOMM40LQ969M1 308 aa8.77□□□□□ -1.01
SSBP3-206ENST00000420121 R3HDM4Q96D70 268 aa8.77□□□□□ -1.01
SSBP3-206ENST00000420121 AKR1E2Q96JD6 320 aa8.77□□□□□ -1.01
SSBP3-206ENST00000420121 DERL3Q96Q80 235 aa8.77□□□□□ -1.01
SSBP3-206ENST00000420121 CNOT2Q9NZN8 540 aaKnown RBP8.77□□□□□ -1.01
SSBP3-206ENST00000420121 PNMA8CA0A1B0GUJ8 204 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 TMEM30CPA0ZSE6 113 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 EFCAB10A6NFE3 127 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 PRB2P02812 416 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-206ENST00000420121 MT-ND4P03905 459 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 CSTBP04080 98 aaKnown RBP8.76□□□□□ -1.01
SSBP3-206ENST00000420121 CD1AP06126 327 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 SNRNP70P08621 437 aaKnown RBP8.76□□□□□ -1.01
SSBP3-206ENST00000420121 MNDAP41218 407 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 GNG10P50151 68 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 ARHGDIBP52566 201 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 GP2P55259 537 aaKnown RBP8.76□□□□□ -1.01
SSBP3-206ENST00000420121 SLC22A6Q4U2R8 563 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 ARSJQ5FYB0 599 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-206ENST00000420121 CCDC144NLQ6NUI1 221 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 ZNF497Q6ZNH5 498 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 SLC16A12Q6ZSM3 486 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 AHSA2Q719I0 299 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 C8orf59Q8N0T1 100 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-206ENST00000420121 GAPTQ8N292 157 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 DRAM1Q8N682 238 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 NANOGP1Q8N7R0 232 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 WFDC9Q8NEX5 89 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 UBALD1Q8TB05 177 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 CAPSLQ8WWF8 208 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 MUL1Q969V5 352 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 RPEQ96AT9 228 aa8.76□□□□□ -1.01
SSBP3-206ENST00000420121 AMMECR1Q9Y4X0 333 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-206ENST00000420121 A6NJY4 79 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 ANKRD65E5RJM6 399 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 ORC5O43913 435 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 ZNF780AO75290 641 aaPredicted RBP8.75□□□□□ -1.01
SSBP3-206ENST00000420121 PEX14O75381 377 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 GTF2F2P13984 249 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 CELP19835 753 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 GZMHP20718 246 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 WNT4P56705 351 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 TAS2R43P59537 309 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 ZNF816Q0VGE8 651 aaPredicted RBP8.75□□□□□ -1.01
SSBP3-206ENST00000420121 MADCAM1Q13477 382 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 EBI3Q14213 229 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 INSL4Q14641 139 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 ATAD3CQ5T2N8 411 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 SIGIRRQ6IA17 410 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 GLIPR1L1Q6UWM5 242 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 CDH26Q8IXH8 852 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 OR8H3Q8N146 312 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 LINC00311Q8N616 119 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 Q8N6K4 173 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 C5orf56Q8N8D9 126 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 ZNF439Q8NDP4 499 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 TMEM104Q8NE00 496 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 OR4F17Q8NGA8 305 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 OR52M1Q8NGK5 317 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 CCDC107Q8WV48 283 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 TFAP2CQ92754 450 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 MYDGFQ969H8 173 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 ST6GALNAC6Q969X2 333 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 OR4F4Q96R69 305 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 CITED4Q96RK1 184 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 PCDHB16Q9NRJ7 776 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 PAK1IP1Q9NWT1 392 aaPredicted RBP8.75□□□□□ -1.01
SSBP3-206ENST00000420121 CHCHD3Q9NX63 227 aaKnown RBP8.75□□□□□ -1.01
SSBP3-206ENST00000420121 GFOD1Q9NXC2 390 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 MRPS28Q9Y2Q9 187 aaKnown RBP8.75□□□□□ -1.01
SSBP3-206ENST00000420121 MOB4Q9Y3A3 225 aa8.75□□□□□ -1.01
SSBP3-206ENST00000420121 IGHV3-43A0A0B4J1X8 118 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 A0A1W2PRX2 142 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 C12orf77C9JDV5 145 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 M0QZK8 103 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 SLC31A2O15432 143 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 SC5DO75845 299 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 MAS1P04201 325 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 FAM106CPP0CH98 169 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 IGHV3-43DP0DP04 118 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 VHLP40337 213 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 RAB7AP51149 207 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 MED21Q13503 144 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 UNQ9370/PRO34162Q6UXP9 181 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 Q6ZPA2 131 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 CENPVQ7Z7K6 275 aaPredicted RBP8.74□□□□□ -1.01
SSBP3-206ENST00000420121 JAGN1Q8N5M9 183 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 C8orf31Q8N9H6 132 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 BPIFB6Q8NFQ5 453 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 SGCDQ92629 289 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 ARL11Q969Q4 196 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 PHF21AQ96BD5 680 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 RBMXL1Q96E39 390 aaKnown RBP8.74□□□□□ -1.01
SSBP3-206ENST00000420121 MRPS24Q96EL2 167 aaKnown RBP8.74□□□□□ -1.01
SSBP3-206ENST00000420121 Q96M66 194 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 S100A13Q99584 98 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 BANF2Q9H503 90 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 CKLFQ9UBR5 152 aa8.74□□□□□ -1.01
SSBP3-206ENST00000420121 NKX1-2Q9UD57 310 aaPredicted RBP8.74□□□□□ -1.01
SSBP3-206ENST00000420121 LSM2Q9Y333 95 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms