RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 EDDM3BP56851 147 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 FXYD4P59646 89 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 TLE4Q04727 773 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 HMGN3Q15651 99 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 SWI5Q1ZZU3 235 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 TMEM30BQ3MIR4 351 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 SPRNQ5BIV9 151 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 ATPAF1Q5TC12 328 aaPredicted RBP4.99□□□□□ -1.61
HMGB3-202ENST00000419110 CD276Q5ZPR3 534 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 C11orf71Q6IPW1 123 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 FAHD2BQ6P2I3 314 aaPredicted RBP4.99□□□□□ -1.61
HMGB3-202ENST00000419110 ZNF880Q6PDB4 577 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 GLDNQ6ZMI3 551 aaPredicted RBP4.99□□□□□ -1.61
HMGB3-202ENST00000419110 NLRC3Q7RTR2 1065 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 OVCH2Q7RTZ1 564 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 LHFPL1Q86WI0 220 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 SLC38A6Q8IZM9 456 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 CADM3Q8N126 398 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 GAPTQ8N292 157 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 ZNF565Q8N9K5 539 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 OR5D13Q8NGL4 314 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 OR13C8Q8NGS7 320 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 OR10J5Q8NHC4 309 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 ANGPTL6Q8NI99 470 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 ZFAND1Q8TCF1 268 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 MARCH1Q8TCQ1 289 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 NEU4Q8WWR8 484 aaPredicted RBP4.99□□□□□ -1.61
HMGB3-202ENST00000419110 IL1F10Q8WWZ1 152 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 MOB3AQ96BX8 217 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 C14orf79Q96F83 325 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 SDSLQ96GA7 329 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 FAHD2AQ96GK7 314 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 COQ2Q96H96 371 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 GAFA1Q96PS6 74 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 ZNF2Q9BSG1 426 aaPredicted RBP4.99□□□□□ -1.61
HMGB3-202ENST00000419110 BEX2Q9BXY8 128 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 CLEC4MQ9H2X3 399 aaPredicted RBP4.99□□□□□ -1.61
HMGB3-202ENST00000419110 OR51J1Q9H342 316 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 BEX1Q9HBH7 125 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 DLL4Q9NR61 685 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 MBNL3Q9NUK0 354 aaKnown RBP4.99□□□□□ -1.61
HMGB3-202ENST00000419110 OR6C3Q9NZP0 311 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 ZNF221Q9UK13 617 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 KCNS2Q9ULS6 477 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 VSIG4Q9Y279 399 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 PPIAL4AQ9Y536 164 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 ADGRG4Q8IZF6 3080 aa4.99□□□□□ -1.61
HMGB3-202ENST00000419110 IGKV1D-8A0A087WSZ0 117 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 TRGV10A0A0A0MS01 117 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 A0A0A6YYJ9 748 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 CEACAM18A8MTB9 384 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 ADARB2-AS1A8MUL3 147 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 K7N7A8 449 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 TMPRSS2O15393 492 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 ADAM20O43506 726 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 NDUFA2O43678 99 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 PSPNO60542 156 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 CCNKO75909 580 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 PPYP01298 95 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 GYPAP02724 150 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 HPXP02790 462 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 CTSDP07339 412 aaPredicted RBP4.98□□□□□ -1.61
HMGB3-202ENST00000419110 HNRNPCP07910 306 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB3-202ENST00000419110 RPS2P15880 293 aaKnown RBP4.98□□□□□ -1.61
HMGB3-202ENST00000419110 AADACP22760 399 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 IL2RGP31785 369 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 FCGR2CP31995 323 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 RBMXP38159 391 aaKnown RBP4.98□□□□□ -1.61
HMGB3-202ENST00000419110 MRPS11P82912 194 aaKnown RBP4.98□□□□□ -1.61
HMGB3-202ENST00000419110 BAMBIQ13145 260 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 DHRS2Q13268 280 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 LRRC10Q5BKY1 277 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 FAM201AQ5SY85 155 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 ZNF626Q68DY1 528 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 ZNF788Q6ZQV5 615 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 C17orf107Q6ZR85 190 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 LYG2Q86SG7 212 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 FAM185AQ8N0U4 392 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 ZCCHC24Q8N2G6 241 aaKnown RBP4.98□□□□□ -1.61
HMGB3-202ENST00000419110 PRR18Q8N4B5 295 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 SPICQ8N5J4 248 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 CD177Q8N6Q3 437 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 FAM216BQ8N7L0 139 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 DEFB108BQ8NET1 73 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 LILRB1Q8NHL6 650 aaPredicted RBP4.98□□□□□ -1.61
HMGB3-202ENST00000419110 TERB2Q8NHR7 220 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 MRGPRDQ8TDS7 321 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 ZNF431Q8TF32 576 aaPredicted RBP4.98□□□□□ -1.61
HMGB3-202ENST00000419110 FAM216AQ8WUB2 273 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 CHAC2Q8WUX2 184 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 CCL17Q92583 94 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 ZNF486Q96H40 463 aaPredicted RBP4.98□□□□□ -1.61
HMGB3-202ENST00000419110 MED30Q96HR3 178 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 CYYR1Q96J86 154 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 PHB2Q99623 299 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 CCL19Q99731 98 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 MDFIQ99750 246 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 SEC22CQ9BRL7 303 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 GAL3ST2Q9H3Q3 398 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 TAF9BQ9HBM6 251 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms