RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 COQ2Q96H96 371 aa8.43□□□□□ -1.06
HMGA1P6-201ENST00000418454 GAFA1Q96PS6 74 aa8.43□□□□□ -1.06
HMGA1P6-201ENST00000418454 MED28Q9H204 178 aa8.43□□□□□ -1.06
HMGA1P6-201ENST00000418454 CLEC4MQ9H2X3 399 aaPredicted RBP8.43□□□□□ -1.06
HMGA1P6-201ENST00000418454 TAF9BQ9HBM6 251 aa8.43□□□□□ -1.06
HMGA1P6-201ENST00000418454 ING3Q9NXR8 418 aa8.43□□□□□ -1.06
HMGA1P6-201ENST00000418454 MIOXQ9UGB7 285 aa8.43□□□□□ -1.06
HMGA1P6-201ENST00000418454 C14orf166Q9Y224 244 aaKnown RBP8.43□□□□□ -1.06
HMGA1P6-201ENST00000418454 OR2W1Q9Y3N9 320 aa8.43□□□□□ -1.06
HMGA1P6-201ENST00000418454 RP1L1Q8IWN7 2480 aaPredicted RBP8.43□□□□□ -1.06
HMGA1P6-201ENST00000418454 USP24Q9UPU5 2620 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 MEIKINA0A087WXM9 373 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 A0A0B4J293 547 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 A0A1W2PPH5 198 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 OR5H14A6NHG9 310 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 ZNF729A6NN14 1252 aaPredicted RBP8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 F2RL2O00254 374 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 NDUFB3O43676 98 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 YPEL1O60688 119 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 RGS11O94810 467 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 DUS4LO95620 317 aaKnown RBP8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 SOD3P08294 240 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 SCTP09683 121 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 ZNF728P0DKX0 622 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 ANXA3P12429 323 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 RCC1P18754 421 aaPredicted RBP8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 HERV-K104P61576 105 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 AESQ08117 197 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 Q6ZPA2 131 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 LYG2Q86SG7 212 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 AKAP14Q86UN6 197 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 CMTM1Q8IZ96 169 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 TCTEX1D1Q8N7M0 179 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 ASCC1Q8N9N2 400 aaKnown RBP8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 MITD1Q8WV92 249 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 EDARADDQ8WWZ3 215 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 YPEL2Q96QA6 119 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 RTBDNQ9BSG5 229 aaPredicted RBP8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 C5orf66Q9H5L9 145 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 PLEKHF2Q9H8W4 249 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 BARX1Q9HBU1 254 aaPredicted RBP8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 FAM212BQ9NTI7 297 aaPredicted RBP8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 KIF25Q9UIL4 384 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 JPT1Q9UK76 154 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 VSIG4Q9Y279 399 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 LINC00312Q9Y6C7 94 aa8.42□□□□□ -1.06
HMGA1P6-201ENST00000418454 TRGV10A0A0A0MS01 117 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 IGHV3-64DA0A0J9YX35 117 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 KBTBD11-OT1A0A1B0GTJ5 212 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 C9orf170A2RU37 121 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 FAM172BPA6NC97 362 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 C3orf80F5H4A9 247 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 C15orf65H3BRN8 121 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 SDCBPO00560 298 aaPredicted RBP8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 SFT2D2O95562 160 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 IGHV2-70P01814 119 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 RBP4P02753 201 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 SULT1A3P0DMM9 295 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 SULT1A4P0DMN0 295 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 COX6B1P14854 86 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 DAOP14920 347 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 IL2RGP31785 369 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 CD80P33681 288 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 SRPXP78539 464 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 SRSF4Q08170 494 aaKnown RBP8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 ATXN7L3Q14CW9 347 aaPredicted RBP8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 C4orf46Q504U0 113 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 IGSF11Q5DX21 431 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 SP5Q6BEB4 398 aaPredicted RBP8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 GLCCI1Q86VQ1 547 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 LDLRAD3Q86YD5 345 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 SGPP2Q8IWX5 399 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 TCTE3Q8IZS6 198 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 BATF2Q8N1L9 274 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 ZCCHC24Q8N2G6 241 aaKnown RBP8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 LRTM2Q8N967 370 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 C8orf31Q8N9H6 132 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 BVESQ8NE79 360 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 MARCH1Q8TCQ1 289 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 PHB2Q99623 299 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 TMEM246Q9BRR3 403 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 SUCNR1Q9BXA5 334 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 GAL3ST2Q9H3Q3 398 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 SLC25A10Q9UBX3 287 aaPredicted RBP8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 CLN8Q9UBY8 286 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 ZNF221Q9UK13 617 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 FLVCR2Q9UPI3 526 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 ATRXP46100 2492 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 CACNA1BQ00975 2339 aa8.41□□□□□ -1.06
HMGA1P6-201ENST00000418454 NBEAQ8NFP9 2946 aa8.4□□□□□ -1.06
HMGA1P6-201ENST00000418454 IGSF10Q6WRI0 2623 aa8.4□□□□□ -1.06
HMGA1P6-201ENST00000418454 TPRP12270 2363 aaKnown RBP8.4□□□□□ -1.06
HMGA1P6-201ENST00000418454 IGKV1-6A0A0C4DH72 117 aa8.4□□□□□ -1.06
HMGA1P6-201ENST00000418454 C12orf77C9JDV5 145 aa8.4□□□□□ -1.06
HMGA1P6-201ENST00000418454 J3QKU1 62 aa8.4□□□□□ -1.06
HMGA1P6-201ENST00000418454 NDUFS8O00217 210 aa8.4□□□□□ -1.06
HMGA1P6-201ENST00000418454 GPR31O00270 319 aa8.4□□□□□ -1.06
HMGA1P6-201ENST00000418454 HSPB6O14558 160 aa8.4□□□□□ -1.06
HMGA1P6-201ENST00000418454 TMPRSS2O15393 492 aa8.4□□□□□ -1.06
HMGA1P6-201ENST00000418454 CCNKO75909 580 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms