RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 GRINAQ7Z429 371 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 GBGT1Q8N5D6 347 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 OR2J1Q9GZK6 312 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 FOXJ2Q9P0K8 574 aa12.72□□□□□ -0.37
NCKIPSD-204ENST00000416649 COL4A2P08572 1712 aa12.71□□□□□ -0.37
NCKIPSD-204ENST00000416649 FOXI3A8MTJ6 420 aaPredicted RBP12.71□□□□□ -0.37
NCKIPSD-204ENST00000416649 CLDN17P56750 224 aa12.71□□□□□ -0.37
NCKIPSD-204ENST00000416649 OR1D5P58170 312 aa12.71□□□□□ -0.37
NCKIPSD-204ENST00000416649 SSX7Q7RTT5 188 aa12.71□□□□□ -0.37
NCKIPSD-204ENST00000416649 MYPOPQ86VE0 399 aaPredicted RBP12.71□□□□□ -0.37
NCKIPSD-204ENST00000416649 H1FOOQ8IZA3 346 aaPredicted RBP12.71□□□□□ -0.37
NCKIPSD-204ENST00000416649 ZNF385AQ96PM9 386 aaKnown RBP12.71□□□□□ -0.37
NCKIPSD-204ENST00000416649 WNT5BQ9H1J7 359 aa12.71□□□□□ -0.37
NCKIPSD-204ENST00000416649 LOC400499M0QZD8 3231 aa12.71□□□□□ -0.37
NCKIPSD-204ENST00000416649 NUPR1O60356 82 aa12.71□□□□□ -0.38
NCKIPSD-204ENST00000416649 OR2J2O76002 312 aa12.71□□□□□ -0.38
NCKIPSD-204ENST00000416649 IGHMP01871 453 aa12.71□□□□□ -0.38
NCKIPSD-204ENST00000416649 AADACP22760 399 aa12.71□□□□□ -0.38
NCKIPSD-204ENST00000416649 ENDOGQ14249 297 aaKnown RBP12.71□□□□□ -0.38
NCKIPSD-204ENST00000416649 LRTM2Q8N967 370 aa12.71□□□□□ -0.38
NCKIPSD-204ENST00000416649 CCDC71LQ8N9Z2 235 aa12.71□□□□□ -0.38
NCKIPSD-204ENST00000416649 SCGB1C1Q8TD33 95 aa12.71□□□□□ -0.38
NCKIPSD-204ENST00000416649 OR51I2Q9H344 312 aa12.71□□□□□ -0.38
NCKIPSD-204ENST00000416649 PLK3Q9H4B4 646 aa12.71□□□□□ -0.38
NCKIPSD-204ENST00000416649 AURKAIP1Q9NWT8 199 aaPredicted RBP12.71□□□□□ -0.38
NCKIPSD-204ENST00000416649 NAT8Q9UHE5 227 aa12.71□□□□□ -0.38
NCKIPSD-204ENST00000416649 ETV2O00321 342 aaPredicted RBP12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 RPS18P62269 152 aaKnown RBP12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 DEFB123Q8N688 67 aa12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 OR2T10Q8NGZ9 312 aa12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 RNASE8Q8TDE3 154 aaKnown RBP12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 ATP5SQ99766 215 aa12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 ANGPTL4Q9BY76 406 aa12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 ZNF286AQ9HBT8 521 aa12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 Q9N2K0 584 aa12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 PIGLQ9Y2B2 252 aa12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 MRPS17Q9Y2R5 130 aaKnown RBP12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 TRDCB7Z8K6 153 aa12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 CRYABP02511 175 aaKnown RBP12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 CHRNA7P36544 502 aa12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 MTCP1P56278 107 aa12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 MAML2Q8IZL2 1156 aaPredicted RBP12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 OR5L2Q8NGL0 311 aa12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 OR10G4Q8NGN3 311 aa12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 DECR2Q9NUI1 292 aa12.7□□□□□ -0.38
NCKIPSD-204ENST00000416649 KNTC1P50748 2209 aa12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 DIDO1Q9BTC0 2240 aaKnown RBP12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 CDS2O95674 445 aa12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 IGLV3-21P80748 117 aaPredicted RBP12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 ACOT6Q3I5F7 207 aaPredicted RBP12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 ODF3L1Q8IXM7 274 aa12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 SLC46A1Q96NT5 459 aa12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 MOB1AQ9H8S9 216 aa12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 MPPED1O15442 326 aa12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 ZNHIT1O43257 154 aa12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 ZNF133P52736 654 aaPredicted RBP12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 HIST1H3AP68431 136 aa12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 RNF151Q2KHN1 245 aa12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 SPIN2AQ99865 258 aa12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 SPIN2BQ9BPZ2 258 aa12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 LRP4O75096 1905 aa12.69□□□□□ -0.38
NCKIPSD-204ENST00000416649 NCOA6Q14686 2063 aaPredicted RBP12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 A0A1W2PNV4 684 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 AQP7O14520 342 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 ZNF737O75373 536 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 HRASP01112 189 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 IGLV3-19P01714 112 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 PDLIM4P50479 330 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 RPL23P62829 140 aaKnown RBP12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 ZNF726P1Q15940 193 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 TMEM41BQ5BJD5 291 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 CRIP3Q6Q6R5 217 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 PATZ1Q9HBE1 687 aaKnown RBP12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 ZNF160Q9HCG1 818 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 ZFHX4Q86UP3 3567 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 A0A1W2PR77 199 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 GRIFINA4D1Z8 144 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 FRG2CA6NGY1 282 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 ALG1L2C9J202 215 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 RAB7AP51149 207 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 IZUMO4Q1ZYL8 232 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 SP5Q6BEB4 398 aaPredicted RBP12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 TBC1D26Q86UD7 250 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 DTX1Q86Y01 620 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 VN1R17PQ8TDU5 208 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 TM2D1Q9BX74 207 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 TUBG2Q9NRH3 451 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 EP300Q09472 2414 aaPredicted RBP12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 MAP1LC3B2A6NCE7 125 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 CHRNB4P30926 498 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 CXCL12P48061 93 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 PIGYQ3MUY2 71 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 ACTL10Q5JWF8 245 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 TGIF2LYQ8IUE0 185 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 EXTL1Q92935 676 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 LYZL4Q96KX0 146 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 Q96M66 194 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 GUCD1Q96NT3 240 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 MIEN1Q9BRT3 115 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 MAP1LC3BQ9GZQ8 125 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms