RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 EGLN1Q9GZT9 426 aa7.75□□□□□ -1.17
CHRNA1-206ENST00000416004 MS4A7Q9GZW8 240 aaPredicted RBP7.75□□□□□ -1.17
CHRNA1-206ENST00000416004 TLNRD1Q9H1K6 362 aa7.75□□□□□ -1.17
CHRNA1-206ENST00000416004 MTFP1Q9UDX5 166 aa7.75□□□□□ -1.17
CHRNA1-206ENST00000416004 CHD3Q12873 2000 aaKnown RBP7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 HIVEP2P31629 2446 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 LINC00587B1AMM8 73 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 TRAPPC2LH3BP13 241 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 L7N2F9 121 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 WNT9BO14905 357 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 SCGNO76038 276 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 PTBP3O95758 552 aaKnown RBP7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 CYB5AP00167 134 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 LPLP06858 475 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 GIPP09681 153 aaPredicted RBP7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 PGA5P0DJD9 388 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 HOXB4P17483 251 aaPredicted RBP7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 CXCL3P19876 107 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 TNFSF4P23510 183 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 CHATP28329 748 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 GPR6P46095 362 aaPredicted RBP7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 ERVK11-1P61568 191 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 TSPAN5P62079 268 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 CHRFAM7AQ494W8 412 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 FAAP20Q6NZ36 180 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 WDR82Q6UXN9 313 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 BTN2A1Q7KYR7 527 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 TMEM17Q86X19 198 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 ZCCHC24Q8N2G6 241 aaKnown RBP7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 SPICQ8N5J4 248 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 OR2T35Q8NGX2 323 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 DYRK2Q92630 601 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 OR2V2Q96R30 315 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 DIRC2Q96SL1 478 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 NRIP2Q9BQI9 281 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 TCEAL7Q9BRU2 100 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 CHODLQ9H9P2 273 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 NKIRAS2Q9NYR9 191 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 CDC42EP3Q9UKI2 254 aa7.74□□□□□ -1.17
CHRNA1-206ENST00000416004 ANKRD20A5PA0PJZ0 165 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 A6NLC8 198 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 C17orf100A8MU93 164 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 G3V3Q6 166 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 WRBO00258 174 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 ST8SIA5O15466 376 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 CRLF1O75462 422 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 RP2O75695 350 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 IGHV1-46P01743 117 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 MT-ND4P03905 459 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 GSTP1P09211 210 aaKnown RBP7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 GIFP27352 417 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 PMELP40967 661 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 CD200P41217 278 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 RAP2BP61225 183 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 MRPS11P82912 194 aaKnown RBP7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 FAM189A2Q15884 450 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 SFRP4Q6FHJ7 346 aaPredicted RBP7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 UQCC3Q6UW78 93 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 C17orf107Q6ZR85 190 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 TRAPPC6BQ86SZ2 158 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 PEG10Q86TG7 708 aaKnown RBP7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 FAM58AQ8N1B3 248 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 TOMM5Q8N4H5 51 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 GVQW1Q8N7I0 195 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 DMBX1Q8NFW5 382 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 EMG1Q92979 244 aaKnown RBP7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 TIMD4Q96H15 378 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 MEGF10Q96KG7 1140 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 CXorf58Q96LI9 332 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 SULT4A1Q9BR01 284 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 HDHD3Q9BSH5 251 aaPredicted RBP7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 FAAP24Q9BTP7 215 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 BPESC1Q9GZL8 116 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 WDR13Q9H1Z4 485 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 SLC25A32Q9H2D1 315 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 C1orf123Q9NWV4 160 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 VPS13CQ709C8 3753 aa7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 SETD2Q9BYW2 2564 aaPredicted RBP7.73□□□□□ -1.17
CHRNA1-206ENST00000416004 HMSDA8MTL9 139 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 SULT1C2O00338 296 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 NUPL2O15504 423 aaKnown RBP7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 SSNA1O43805 119 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 RBBP9O75884 186 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 OR7C1O76099 320 aaPredicted RBP7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 APOC3P02656 99 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 S100A9P06702 114 aaKnown RBP7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 S100PP25815 95 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 TMEM33P57088 247 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 DYRK1AQ13627 763 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 NLRC3Q7RTR2 1065 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 POC1AQ8NBT0 407 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 PCNPQ8WW12 178 aaKnown RBP7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 ITLN1Q8WWA0 313 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 SAP30LQ9HAJ7 183 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 HRASLSQ9HDD0 168 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 PLEKHJ1Q9NW61 149 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 AK3Q9UIJ7 227 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 ZDHHC8Q9ULC8 765 aa7.72□□□□□ -1.17
CHRNA1-206ENST00000416004 POLDIP2Q9Y2S7 368 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms