RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 SH2D2AQ9NP31 389 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 G6PC2Q9NQR9 355 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 SF3B6Q9Y3B4 125 aaKnown RBP10.37□□□□□ -0.75
PTPRF-205ENST00000414879 C7orf66A4D0T2 115 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 SYNGR3O43761 229 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 ZIC3O60481 467 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 PTHLHP12272 177 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 CD80P33681 288 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 INPP5JQ15735 1006 aaPredicted RBP10.37□□□□□ -0.75
PTPRF-205ENST00000414879 CLEC2AQ6UVW9 174 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 NEURL2Q9BR09 285 aa10.37□□□□□ -0.75
PTPRF-205ENST00000414879 TDRD6O60522 2096 aaKnown RBP10.36□□□□□ -0.75
PTPRF-205ENST00000414879 SYNGR1O43759 233 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 KHDC1LQ5JSQ8 128 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 WFDC6Q9BQY6 131 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 MMP26Q9NRE1 261 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 MTCH1Q9NZJ7 389 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 INSIG2Q9Y5U4 225 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 F2RL2O00254 374 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 HPRT1P00492 218 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 LGALS7P47929 136 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 AHCTF1Q8WYP5 2266 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 UBE2L5PA0A1B0GUS4 154 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 SRP14P37108 136 aaKnown RBP10.36□□□□□ -0.75
PTPRF-205ENST00000414879 OPRK1P41145 380 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 FOXL2P58012 376 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 USF2Q15853 346 aaPredicted RBP10.36□□□□□ -0.75
PTPRF-205ENST00000414879 GAPTQ8N292 157 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 STXBP6Q8NFX7 210 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 ZNF714Q96N38 554 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 MIOXQ9UGB7 285 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 VWA8A3KMH1 1905 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 C9orf172C9J069 976 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 K7N7A8 449 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 CST7O76096 145 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 ZNF260Q3ZCT1 412 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 ABLIM2Q6H8Q1 611 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 GLCCI1Q86VQ1 547 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 OR5C1Q8NGR4 320 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 OR1L8Q8NGR8 309 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 SCMH1Q96GD3 660 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 ACY3Q96HD9 319 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 GPR137Q96N19 417 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 RASL11BQ9BPW5 248 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 SMIM7Q9BQ49 75 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 NKX6-2Q9C056 277 aaPredicted RBP10.36□□□□□ -0.75
PTPRF-205ENST00000414879 MSL2Q9HCI7 577 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 TMEM167BQ9NRX6 74 aa10.36□□□□□ -0.75
PTPRF-205ENST00000414879 DEFB108AA8MXU0 73 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 COX7A1P24310 79 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 MPV17P39210 176 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 BTN1A1Q13410 526 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 PIGYQ3MUY2 71 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 FNDC7Q5VTL7 733 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 LRRC75AQ8NAA5 344 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 TIMM8BQ9Y5J9 83 aaPredicted RBP10.35□□□□□ -0.75
PTPRF-205ENST00000414879 NLRC5Q86WI3 1866 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 ATP5IP56385 69 aaPredicted RBP10.35□□□□□ -0.75
PTPRF-205ENST00000414879 ZNF345Q14585 488 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 NSUN5P2Q63ZY6 315 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 FAM90A1Q86YD7 464 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 OR2V2Q96R30 315 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 TMPRSS13Q9BYE2 586 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 CISD1Q9NZ45 108 aaKnown RBP10.35□□□□□ -0.75
PTPRF-205ENST00000414879 OR13C7P0DN81 318 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 COL10A1Q03692 680 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 ZNF79Q15937 498 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 MRGPRGQ86SM5 289 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 UBAC2Q8NBM4 344 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 TVP23CQ96ET8 276 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 ATP5SQ99766 215 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 OR51I2Q9H344 312 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 PTPRDP23468 1912 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 ZDBF2Q9HCK1 2354 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 PLA2G10O15496 165 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 SLC25A4P12235 298 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 Q56UQ5 140 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 ACSM6Q6P461 480 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 DPPA3Q6W0C5 159 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 OR52L2PQ8NGH6 319 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 IL22RA2Q969J5 263 aa10.35□□□□□ -0.75
PTPRF-205ENST00000414879 LRRC3CA6NJW4 275 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 H0Y980 276 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 FAM3AP98173 230 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 RPL7L1Q6DKI1 246 aaKnown RBP10.34□□□□□ -0.75
PTPRF-205ENST00000414879 AQP3Q92482 292 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 ONECUT2O95948 504 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 GAPDHP04406 335 aaKnown RBP10.34□□□□□ -0.75
PTPRF-205ENST00000414879 MUC1P15941 1255 aaPredicted RBP10.34□□□□□ -0.75
PTPRF-205ENST00000414879 KLF14Q8TD94 323 aaPredicted RBP10.34□□□□□ -0.75
PTPRF-205ENST00000414879 DTD1Q8TEA8 209 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 SIGLEC12Q96PQ1 595 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 AMELYQ99218 206 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 CCL28Q9NRJ3 127 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 IGHV3-43A0A0B4J1X8 118 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 FAM90A26D6RGX4 464 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 CORTO00230 105 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 IGHV3-43DP0DP04 118 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 SULT1A1P50225 295 aa10.34□□□□□ -0.75
PTPRF-205ENST00000414879 UCP3P55916 312 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms