RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 C22orf15Q8WYQ4 148 aa14.02□□□□□ -0.16
SCAMP4-204ENST00000414057 SULT4A1Q9BR01 284 aa14.02□□□□□ -0.16
SCAMP4-204ENST00000414057 RIMS4Q9H426 269 aaPredicted RBP14.02□□□□□ -0.16
SCAMP4-204ENST00000414057 UFSP2Q9NUQ7 469 aa14.02□□□□□ -0.16
SCAMP4-204ENST00000414057 CLN8Q9UBY8 286 aa14.02□□□□□ -0.16
SCAMP4-204ENST00000414057 MEIS3P1A6NDR6 274 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 SRRM5B3KS81 715 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 MCRIP1C9JLW8 97 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 SH2D1BO14796 132 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 KNG1P01042 644 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 BTCP35070 178 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 RBMXP38159 391 aaKnown RBP14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 PLA1AQ53H76 456 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 ACP7Q6ZNF0 438 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 HOGA1Q86XE5 327 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 BATF2Q8N1L9 274 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 C3orf56Q8N813 242 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 LRRC29Q8WV35 223 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 CREB3L1Q96BA8 519 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 CMSS1Q9BQ75 279 aaKnown RBP14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 FAAP24Q9BTP7 215 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 C12orf4Q9NQ89 552 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 RNF7Q9UBF6 113 aa14.01□□□□□ -0.17
SCAMP4-204ENST00000414057 DEGS1O15121 323 aa14□□□□□ -0.17
SCAMP4-204ENST00000414057 RAB3DO95716 219 aa14□□□□□ -0.17
SCAMP4-204ENST00000414057 MT-ND4P03905 459 aa14□□□□□ -0.17
SCAMP4-204ENST00000414057 CD3DP04234 171 aa14□□□□□ -0.17
SCAMP4-204ENST00000414057 NPY4RP50391 375 aa14□□□□□ -0.17
SCAMP4-204ENST00000414057 TAS2R46P59540 309 aa14□□□□□ -0.17
SCAMP4-204ENST00000414057 SRSF7Q16629 238 aaKnown RBP eCLIP14□□□□□ -0.17
SCAMP4-204ENST00000414057 ZNF826PQ6ZT77 177 aa14□□□□□ -0.17
SCAMP4-204ENST00000414057 ZDHHC22Q8N966 263 aa14□□□□□ -0.17
SCAMP4-204ENST00000414057 OR4C16Q8NGL9 310 aa14□□□□□ -0.17
SCAMP4-204ENST00000414057 MS4A7Q9GZW8 240 aaPredicted RBP14□□□□□ -0.17
SCAMP4-204ENST00000414057 NLKQ9UBE8 527 aa14□□□□□ -0.17
SCAMP4-204ENST00000414057 AK3Q9UIJ7 227 aa14□□□□□ -0.17
SCAMP4-204ENST00000414057 NUBP2Q9Y5Y2 271 aa14□□□□□ -0.17
SCAMP4-204ENST00000414057 IGHV2-70DA0A0C4DH43 119 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 A0A1B0GVG6 124 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 NDUFA2O43678 99 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 SPNP16150 400 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 CD80P33681 288 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 SNU13P55769 128 aaKnown RBP13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 UBA52P62987 128 aaKnown RBP13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 RNASE10Q5GAN6 216 aaKnown RBP13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 Q6P435 159 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 RTN4RL2Q86UN3 420 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 SIGLECL1Q8N7X8 197 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 MARVELD1Q9BSK0 173 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 MCUBQ9NWR8 336 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 IL36RNQ9UBH0 155 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 KIR2DS1A0A191URI9 304 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 DISC1C4P0D8 188 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 LHBP01229 141 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 ZNF44P15621 663 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 LMO1P25800 156 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 KCNJ3P48549 501 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 RAG2P55895 527 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 PAX2Q02962 417 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 FAM201AQ5SY85 155 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 CD276Q5ZPR3 534 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 GVQW1Q8N7I0 195 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 SUMF2Q8NBJ7 301 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 BEST4Q8NFU0 473 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 OR4K15Q8NH41 348 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 DPCDQ9BVM2 203 aaPredicted RBP13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 ESM1Q9NQ30 184 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 ZNF69Q9UC07 566 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 SCP2D1Q9UJQ7 156 aa13.99□□□□□ -0.17
SCAMP4-204ENST00000414057 TRBV6-6A0A0A6YYG2 114 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 TRAV38-1A0A0B4J264 116 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 TRAV24A0A0B4J272 114 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 OR2H2O95918 312 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 HAND1O96004 215 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 TCRBP04435 133 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 LIPFP07098 398 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 FCGR3AP08637 254 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 AMY2BP19961 511 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 PRTN3P24158 256 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 HLA-DMAP28067 261 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 BAMBIQ13145 260 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 RBMS2Q15434 407 aaKnown RBP13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 KLF17Q5JT82 389 aaPredicted RBP13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 VAX1Q5SQQ9 334 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 WDR25Q64LD2 544 aaPredicted RBP13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 ZNF782Q6ZMW2 699 aaPredicted RBP13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 Q6ZS49 121 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 BTN2A1Q7KYR7 527 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 GCSAMQ8N6F7 178 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 SNAPC3Q92966 411 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 UPRTQ96BW1 309 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 PRRT1Q99946 306 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 SLC2A8Q9NY64 477 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 ZNF581Q9P0T4 197 aa13.98□□□□□ -0.17
SCAMP4-204ENST00000414057 UBE2QL1A1L167 161 aa13.97□□□□□ -0.17
SCAMP4-204ENST00000414057 LGALS8O00214 317 aa13.97□□□□□ -0.17
SCAMP4-204ENST00000414057 SLC33A1O00400 549 aaPredicted RBP13.97□□□□□ -0.17
SCAMP4-204ENST00000414057 ENSAO43768 121 aaKnown RBP13.97□□□□□ -0.17
SCAMP4-204ENST00000414057 NAPSAO96009 420 aa13.97□□□□□ -0.17
SCAMP4-204ENST00000414057 DUSP1P28562 367 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms