RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 BAIAP2L2Q6UXY1 529 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 RFESDQ8TAC1 157 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 NANPQ8TBE9 248 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 PHF21AQ96BD5 680 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 GAL3ST2Q9H3Q3 398 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 CHMP1AQ9HD42 196 aaPredicted RBP25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 CALYQ9NYX4 217 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 ZNF729A6NN14 1252 aaPredicted RBP25.03■■□□□ 1.6
CSNK1E-206ENST00000413574 NAPSAO96009 420 aa25.03■■□□□ 1.6
CSNK1E-206ENST00000413574 FSHBP01225 129 aa25.03■■□□□ 1.6
CSNK1E-206ENST00000413574 IGHV1-8P0DP01 117 aa25.03■■□□□ 1.6
CSNK1E-206ENST00000413574 SRP14P37108 136 aaKnown RBP25.03■■□□□ 1.6
CSNK1E-206ENST00000413574 MZT2AQ6P582 158 aa25.03■■□□□ 1.6
CSNK1E-206ENST00000413574 CMSS1Q9BQ75 279 aaKnown RBP25.03■■□□□ 1.6
CSNK1E-206ENST00000413574 SLIRPQ9GZT3 109 aaKnown RBP25.03■■□□□ 1.6
CSNK1E-206ENST00000413574 NDUFA13Q9P0J0 144 aa25.03■■□□□ 1.6
CSNK1E-206ENST00000413574 CDC42EP3Q9UKI2 254 aa25.03■■□□□ 1.6
CSNK1E-206ENST00000413574 TRAV18A0A075B6X5 111 aa25.02■■□□□ 1.6
CSNK1E-206ENST00000413574 CENPVL3A0A0U1RRI6 287 aa25.02■■□□□ 1.6
CSNK1E-206ENST00000413574 KBTBD11-OT1A0A1B0GTJ5 212 aa25.02■■□□□ 1.6
CSNK1E-206ENST00000413574 RNASEK-C17orf49H0YIS7 233 aa25.02■■□□□ 1.6
CSNK1E-206ENST00000413574 SCGNO76038 276 aa25.02■■□□□ 1.6
CSNK1E-206ENST00000413574 HOXB4P17483 251 aaPredicted RBP25.02■■□□□ 1.6
CSNK1E-206ENST00000413574 SETD6Q8TBK2 473 aa25.02■■□□□ 1.6
CSNK1E-206ENST00000413574 DGCR14Q96DF8 476 aaKnown RBP25.02■■□□□ 1.6
CSNK1E-206ENST00000413574 S100A16Q96FQ6 103 aaKnown RBP25.02■■□□□ 1.6
CSNK1E-206ENST00000413574 UNKLQ9H9P5 680 aaKnown RBP25.02■■□□□ 1.6
CSNK1E-206ENST00000413574 hCG_1809904A0A1W2PP81 198 aa25.01■■□□□ 1.59
CSNK1E-206ENST00000413574 A0A1W2PPE2 198 aa25.01■■□□□ 1.59
CSNK1E-206ENST00000413574 A0A1W2PR64 198 aa25.01■■□□□ 1.59
CSNK1E-206ENST00000413574 A0A1W2PRV1 198 aa25.01■■□□□ 1.59
CSNK1E-206ENST00000413574 CLPXO76031 633 aa25.01■■□□□ 1.59
CSNK1E-206ENST00000413574 ELK1P19419 428 aa25.01■■□□□ 1.59
CSNK1E-206ENST00000413574 ZNF260Q3ZCT1 412 aa25.01■■□□□ 1.59
CSNK1E-206ENST00000413574 DIABLOQ9NR28 239 aa25.01■■□□□ 1.59
CSNK1E-206ENST00000413574 TMEM235A6NFC5 223 aa25.01■■□□□ 1.59
CSNK1E-206ENST00000413574 CTDSP2O14595 271 aa25.01■■□□□ 1.59
CSNK1E-206ENST00000413574 LTC4SQ16873 150 aa25.01■■□□□ 1.59
CSNK1E-206ENST00000413574 HCP5Q6MZN7 132 aa25.01■■□□□ 1.59
CSNK1E-206ENST00000413574 MBNL3Q9NUK0 354 aaKnown RBP25.01■■□□□ 1.59
CSNK1E-206ENST00000413574 A0A1W2PRD5 423 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 A0A1W2PRF3 423 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 A0A1W2PRM7 423 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 FAM172BPA6NC97 362 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 C12orf77C9JDV5 145 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 C15orf65H3BRN8 121 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 RBP4P02753 201 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 CD3GP09693 182 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 GZMHP20718 246 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 MADCAM1Q13477 382 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 CHRFAM7AQ494W8 412 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 UTF1Q5T230 341 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 RUSC1-AS1Q66K80 236 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 HEPN1Q6WQI6 88 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 BRD3OSQ6XYD6 125 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 PNKDQ8N490 385 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 PRR18Q8N4B5 295 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 ARL11Q969Q4 196 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 C12orf4Q9NQ89 552 aa25■■□□□ 1.59
CSNK1E-206ENST00000413574 SERPINE3A8MV23 424 aa24.99■■□□□ 1.59
CSNK1E-206ENST00000413574 APOA1P02647 267 aa24.99■■□□□ 1.59
CSNK1E-206ENST00000413574 PTHLHP12272 177 aa24.99■■□□□ 1.59
CSNK1E-206ENST00000413574 COX7A1P24310 79 aa24.99■■□□□ 1.59
CSNK1E-206ENST00000413574 ARFRP1Q13795 201 aa24.99■■□□□ 1.59
CSNK1E-206ENST00000413574 MIXL1Q9H2W2 232 aa24.99■■□□□ 1.59
CSNK1E-206ENST00000413574 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP24.99■■□□□ 1.59
CSNK1E-206ENST00000413574 SOX21Q9Y651 276 aaPredicted RBP24.99■■□□□ 1.59
CSNK1E-206ENST00000413574 NAV3Q8IVL0 2385 aa24.98■■□□□ 1.59
CSNK1E-206ENST00000413574 A0A0A6YYH2 397 aa24.98■■□□□ 1.59
CSNK1E-206ENST00000413574 A6NJ64 397 aa24.98■■□□□ 1.59
CSNK1E-206ENST00000413574 NPIPB11E5RHQ5 1161 aa24.98■■□□□ 1.59
CSNK1E-206ENST00000413574 XRCC3O43542 346 aa24.98■■□□□ 1.59
CSNK1E-206ENST00000413574 CRLF1O75462 422 aa24.98■■□□□ 1.59
CSNK1E-206ENST00000413574 GPR157Q5UAW9 335 aa24.98■■□□□ 1.59
CSNK1E-206ENST00000413574 ZNF880Q6PDB4 577 aa24.98■■□□□ 1.59
CSNK1E-206ENST00000413574 C22orf15Q8WYQ4 148 aa24.98■■□□□ 1.59
CSNK1E-206ENST00000413574 CMTM3Q96MX0 182 aa24.98■■□□□ 1.59
CSNK1E-206ENST00000413574 LINC00574Q9H8X3 128 aa24.98■■□□□ 1.59
CSNK1E-206ENST00000413574 TAF9BQ9HBM6 251 aa24.98■■□□□ 1.59
CSNK1E-206ENST00000413574 SESN1Q9Y6P5 492 aa24.98■■□□□ 1.59
CSNK1E-206ENST00000413574 RGS5O15539 181 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 C6orf183Q5T699 404 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 HACD4Q5VWC8 232 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 LAX1Q8IWV1 398 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 NUDCD2Q8WVJ2 157 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 KIRREL1Q96J84 757 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 SUCNR1Q9BXA5 334 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 RIMS4Q9H426 269 aaPredicted RBP24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 NUP50Q9UKX7 468 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 A6NHS1 94 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 FAM25AB3EWG3 89 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 FAM25CB3EWG5 89 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 FAM25GB3EWG6 89 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 ORC5O43913 435 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 GSTP1P09211 210 aaKnown RBP24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 SRD5A1P18405 259 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 NFYBP25208 207 aa24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 MRPS15P82914 257 aaKnown RBP24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 FAM53AQ6NSI3 398 aaPredicted RBP24.97■■□□□ 1.59
CSNK1E-206ENST00000413574 OR1L1Q8NH94 360 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms