RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 OR2W1Q9Y3N9 320 aa11.53□□□□□ -0.56
LIMS1-205ENST00000410093 ESPL1Q14674 2120 aa11.52□□□□□ -0.56
LIMS1-205ENST00000410093 RAB19A4D1S5 217 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 CLEC18AA5D8T8 446 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 MPTX1A8MV57 137 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 H0Y980 276 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 IFNL4K9M1U5 179 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 ST8SIA3O43173 380 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 LILRA1O75019 489 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 NXPH2O95156 264 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 SCTP09683 121 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 HKR1P10072 659 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 SLC25A6P12236 298 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 MMP9P14780 707 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 RPL12P30050 165 aaKnown RBP11.52□□□□□ -0.57
LIMS1-205ENST00000410093 P2RY1P47900 373 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 ZNF154Q13106 437 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 PHLDA2Q53GA4 152 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 SPATA46Q5T0L3 261 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 CXorf67Q86X51 503 aaPredicted RBP11.52□□□□□ -0.57
LIMS1-205ENST00000410093 CLEC18CQ8NCF0 446 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 OR5D13Q8NGL4 314 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 FAM216AQ8WUB2 273 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 MRPL24Q96A35 216 aaKnown RBP11.52□□□□□ -0.57
LIMS1-205ENST00000410093 RRNAD1Q96FB5 475 aaKnown RBP11.52□□□□□ -0.57
LIMS1-205ENST00000410093 OR51B6Q9H340 312 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 ZC4H2Q9NQZ6 224 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 CYTL1Q9NRR1 136 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 MBNL3Q9NUK0 354 aaKnown RBP11.52□□□□□ -0.57
LIMS1-205ENST00000410093 UBE2J1Q9Y385 318 aaPredicted RBP11.52□□□□□ -0.57
LIMS1-205ENST00000410093 WIPI2Q9Y4P8 454 aa11.52□□□□□ -0.57
LIMS1-205ENST00000410093 HS3ST1O14792 307 aa11.51□□□□□ -0.57
LIMS1-205ENST00000410093 BET1O15155 118 aa11.51□□□□□ -0.57
LIMS1-205ENST00000410093 CECR9P0C854 216 aa11.51□□□□□ -0.57
LIMS1-205ENST00000410093 PVALBP20472 110 aaPredicted RBP11.51□□□□□ -0.57
LIMS1-205ENST00000410093 UCP1P25874 307 aa11.51□□□□□ -0.57
LIMS1-205ENST00000410093 GNMTQ14749 295 aa11.51□□□□□ -0.57
LIMS1-205ENST00000410093 MSMO1Q15800 293 aa11.51□□□□□ -0.57
LIMS1-205ENST00000410093 BEX5Q5H9J7 111 aa11.51□□□□□ -0.57
LIMS1-205ENST00000410093 MYPOPQ86VE0 399 aaPredicted RBP11.51□□□□□ -0.57
LIMS1-205ENST00000410093 FAM90A1Q86YD7 464 aa11.51□□□□□ -0.57
LIMS1-205ENST00000410093 ZNF695Q8IW36 515 aa11.51□□□□□ -0.57
LIMS1-205ENST00000410093 H1FOOQ8IZA3 346 aaPredicted RBP11.51□□□□□ -0.57
LIMS1-205ENST00000410093 ZNF610Q8N9Z0 462 aa11.51□□□□□ -0.57
LIMS1-205ENST00000410093 CXorf58Q96LI9 332 aa11.51□□□□□ -0.57
LIMS1-205ENST00000410093 TAAR3PQ9P1P4 343 aa11.51□□□□□ -0.57
LIMS1-205ENST00000410093 SLC25A15Q9Y619 301 aa11.51□□□□□ -0.57
LIMS1-205ENST00000410093 SLC33A1O00400 549 aaPredicted RBP11.5□□□□□ -0.57
LIMS1-205ENST00000410093 GPR137BO60478 399 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 RHBDL1O75783 438 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 CRYZL1O95825 349 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 OR2H2O95918 312 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 VDAC1P21796 283 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 CD200P41217 278 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 PAX5Q02548 391 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 KLRB1Q12918 225 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 HERPUD1Q15011 391 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 TSC22D1Q15714 1073 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 ZNF324BQ6AW86 544 aaPredicted RBP11.5□□□□□ -0.57
LIMS1-205ENST00000410093 TRAT1Q6PIZ9 186 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 WDR86Q86TI4 376 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 TBC1D26Q86UD7 250 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 ZBTB34Q8NCN2 500 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 SECTM1Q8WVN6 248 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 RDH5Q92781 318 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 HS3ST6Q96QI5 342 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 BARX1Q9HBU1 254 aaPredicted RBP11.5□□□□□ -0.57
LIMS1-205ENST00000410093 PRR13Q9NZ81 148 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 KCNIP1Q9NZI2 227 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 TP53TG5Q9Y2B4 290 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 POMT1Q9Y6A1 747 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 BAHCC1Q9P281 2608 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 BORCS7-ASMTA0A0B4J1R7 106 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 IGHV2OR16-5A0A0B4J2B6 119 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 RNF212BA8MTL3 300 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.5□□□□□ -0.57
LIMS1-205ENST00000410093 TIMM8AO60220 97 aaPredicted RBP11.5□□□□□ -0.57
LIMS1-205ENST00000410093 MBPP02686 304 aaPredicted RBP11.5□□□□□ -0.57
LIMS1-205ENST00000410093 FOXF2Q12947 444 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 TMEM268Q5VZI3 342 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 SLC35E4Q6ICL7 350 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 FAM180AQ6UWF9 173 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 LYZL2Q7Z4W2 148 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 UBAC2Q8NBM4 344 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 OR4D5Q8NGN0 318 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 OR10Z1Q8NGY1 313 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 MARC2Q969Z3 335 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 MUCL1Q96DR8 90 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 CCDC120Q96HB5 630 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 IL36RNQ9UBH0 155 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 TRAPPC2LQ9UL33 140 aa11.5□□□□□ -0.57
LIMS1-205ENST00000410093 SHANK1Q9Y566 2161 aa11.49□□□□□ -0.57
LIMS1-205ENST00000410093 GTF3C1Q12789 2109 aa11.49□□□□□ -0.57
LIMS1-205ENST00000410093 IGHV1-18A0A0C4DH31 117 aa11.49□□□□□ -0.57
LIMS1-205ENST00000410093 TMEM30CPA0ZSE6 113 aa11.49□□□□□ -0.57
LIMS1-205ENST00000410093 CDIPTO14735 213 aa11.49□□□□□ -0.57
LIMS1-205ENST00000410093 PTBP3O95758 552 aaKnown RBP11.49□□□□□ -0.57
LIMS1-205ENST00000410093 CFHR2P36980 270 aa11.49□□□□□ -0.57
LIMS1-205ENST00000410093 RPS23P62266 143 aaKnown RBP11.49□□□□□ -0.57
LIMS1-205ENST00000410093 BLOC1S1P78537 153 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms